Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3711 ATGCTCTCCACCCTCCCTCCCTCCGACCCTTTTCTCGACAACCCATTCTCCGCCTTCTCCGGCGGCTTCCCGCCGTGGGATTTTCACGACCTATTTTCCGACGATATAAAACCCACCAGTCCTAAACCCATCACTTCAAGTTCCGGTTCAGATGAACCAAACCAACCCCATGAGAAACGTAAACCGGAATCAGACGAACCGAACCACGGGGCGGTCGACGAGCGAAAGCGCCGACGCATGATATCAAACCGGGAATCGGCCCGAAGGTCACGGATGCGTAAACAGAGACATGTTGAGAATCTAAGGAACCAGTTGAACAAGTGTAGGATGGAAAACCGGGAAATAAAAAACCGGTTGCAGTTCATTTTGTTTCACTTGAACCGGATACGAACCGAAAATGAATGGCTCCGGTCCGAGCGAACCGTGCTGAACCAAAGAATCAACAACTTTACTCAAATTTTGGTTTACCAACAGTTTCATCAACCTTTTTCACCTGCATGGACATGTAACACTACTATGGTGGAATAA 528 0.4867 MLSTLPPSDPFLDNPFSAFSGGFPPWDFHDLFSDDIKPTSPKPITSSSGSDEPNQPHEKRKPESDEPNHGAVDERKRRRMISNRESARRSRMRKQRHVENLRNQLNKCRMENREIKNRLQFILFHLNRIRTENEWLRSERTVLNQRINNFTQILVYQQFHQPFSPAWTCNTTMVE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3711 175 Gene3D - 73 123 - -
Mal5g3711 175 SUPERFAMILY Leucine zipper domain 75 122 IPR046347 GO:0003700|GO:0006355
Mal5g3711 175 PANTHER BZIP TRANSCRIPTION FACTOR 27 172 - -
Mal5g3711 175 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Mal5g3711 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Mal5g3711 175 MobiDBLite consensus disorder prediction 53 88 - -
Mal5g3711 175 MobiDBLite consensus disorder prediction 30 101 - -
Mal5g3711 175 CDD bZIP_plant_GBF1 76 123 IPR045314 GO:0003700|GO:0006355
Mal5g3711 175 Pfam bZIP transcription factor 75 120 IPR004827 GO:0003700|GO:0006355
Mal5g3711 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Mal5g3711 175 Coils Coil 84 118 - -
Mal5g3711 175 PANTHER BZIP TRANSCRIPTION FACTOR 44 27 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3711 Mal-Chr5 104962723 104963250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3711 1 170 bZIP Transcription Factor Family AT2G22850 34.821 4.52e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal5g3711 bZIP_1 1.3e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3711 - - ahf:112800711 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1427 6 25608988 25609461 Mal5g3711 5 104962723 104963250 PCT