Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3690 ATGGATACACTTTTTAGGCTAGTCAATTTTCAACAACAACACCAATATCAACCTGATCCTTCCCTCAACTCCACCACCACCTTAACAACTTCTAGCAGCTCTAGATCCTCAAGACAAACATATCAATATTACCACCAACAAGAAGAAGACGAAGAATGCTTCAACAACTTTTATTACATGGATCATAATAACAACAATGAAGAAGATTTATCCTCCTCTTCTTCTAAACAACACTACTATACTTATCCTTATGCATCCACTACTACTATCACTACTCCAAACACAAACACCACCTATAATACTATTAACACCCCCACCACAACTGATAATTACTCTTTCTCACCCTCTCAAGACTACTTCAACTTTGAACTCTCCGGCAACTCATGGTCACAAAATATCCTCCTTGAAACCGCACGTGCCATTTCCGACAACAACACAAACCAAATCCAACAATTCATGTGGATGCTAAATGAACTTAGTTCCCCTTACGGAGACACGGATCAAAAACTTTCATCTTATTTTCTTCAAGCTTTGTTTAGTCGCATGAACGACGCGGGTGAAAGAACCTACAAAACCTTAACATCCGCATCGGAGAAAACATGTTCCTTTGATTCAACGAGGAAGATGTTGTTGAAGTTTCAAGAAGTTAGTCCTTGGACAACATTTGGACACGTGGCATCCAACGGTGCTATCTTAGAAGCATTAGAAGGTAACCCTAAACTTCACATAATTGATATTAGCAACACTTATTGCACTCAATGGCCAACACTCCTCGAAGCGTTGGCCACTCGCTCCGACGATACTCCACACCTCCGCTTAACCACAGTAGTCACCGCAGTCAGCGGTGGCTCGGTGCAAAAAGTCATGAAGGAAATTGGATCAAGGATGGAAAAATTCGCTAGGCTCATGGGAGTGCCATTTAAATTCAAAATCATTTTCAGTGATCTAAGAGAGTTGAATTTGTGTGATTTGGATATCAAAGAAGATGAAGCTTTGGCTATAAATTGTGTTAACTCCTTGCATTCGATATCCGGCGCCGGAAACCACCGTGATTTGTTTATATCTTTGCTTCGTGGGTTAGAACCTAGGGTTTTAACTATTGTTGAAGAGGAAGCTAATTTAGAAGTTTGTTTTGGTTCGGATTTTGTGGAAGGTTTTGGAGAATGTTTGAGATGGTTTAGGGTTTATTTTGAAGCACTTGATGAAAGCTTTTCAAGAACAAGTAGTGAGAGGTTGATGCTTGAAAGAGAAGCTGGGAGAGGTATTGTTGATTTGATTGCTTGTGATCCTTATGAATCCGTGGAGAGACGTGAAACGGCGGCGCGGTGGAGGAGGAGGTTGCATGGTGGAGGGTTTAATACGGTGTCGTTTAGTGATGAAGTTTGTGATGATGTTAGGGCTTTGTTGAGAAGGTATAAAGAAGGGTGGTCGATGACACAGTGTTCCGATGGTGATACCGGAATATTCTTGTCGTGGAAGGATAAGCCGGTGGTGTGGGCCAGTGTATGGAGGCCATGA 1518 0.4163 MDTLFRLVNFQQQHQYQPDPSLNSTTTLTTSSSSRSSRQTYQYYHQQEEDEECFNNFYYMDHNNNNEEDLSSSSSKQHYYTYPYASTTTITTPNTNTTYNTINTPTTTDNYSFSPSQDYFNFELSGNSWSQNILLETARAISDNNTNQIQQFMWMLNELSSPYGDTDQKLSSYFLQALFSRMNDAGERTYKTLTSASEKTCSFDSTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVSGGSVQKVMKEIGSRMEKFARLMGVPFKFKIIFSDLRELNLCDLDIKEDEALAINCVNSLHSISGAGNHRDLFISLLRGLEPRVLTIVEEEANLEVCFGSDFVEGFGECLRWFRVYFEALDESFSRTSSERLMLEREAGRGIVDLIACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMTQCSDGDTGIFLSWKDKPVVWASVWRP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3690 505 MobiDBLite consensus disorder prediction 15 44 - -
Mal5g3690 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 504 IPR005202 -
Mal5g3690 505 PANTHER PROTEIN SHORT-ROOT 1 504 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Mal5g3690 505 ProSiteProfiles GRAS family profile. 121 504 IPR005202 -
Mal5g3690 505 Pfam GRAS domain family 132 504 IPR005202 -
Mal5g3690 505 MobiDBLite consensus disorder prediction 15 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3690 Mal-Chr5 104636438 104637955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3690 1 505 GRAS Transcription Factor Family AT4G37650 56.377 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g3690 GRAS 2.3e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3690 - - cam:101506038 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3690 5 104636438 104637955 Mal5g3690 5 104636438 104637955 ECH
Mal6g1405 6 25257693 25259171 Mal5g3690 5 104636438 104637955 PCT