Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3672 ATGATGCAATTCACACATTCACTACCTTATTTGCACCAAACAACAACAACTTTTTCAAACCATTCTTCTTCCATGAACAAAAACAATCAAGTACCACAAGATAAGACTACTAAACCATGGTTTCCAACATCCAAAGCTTTAACTACCTTTGGTGACACAAACTGCATGGAACAGTTACTCGTTCATTGCGCGAACGCAATTGAAACCAACGATGTAACACTTGCTCAACAAATCCTTTGGGTTCTCAACAACATAGCACCACAAGACGGCGATTCAAATCAACGCTTAGCTTATAGTTTCCTTAGAGCCCTCACAAATCGCGCAGCAAAAACCGGTACCTGCAAAATGCTAGTAGAACAAGTTTATTCAAACACTCATAACAATCTCAACATAGATACACACAGATTCTCAGTCATTGAACTAGCTAACTTCGTCGATTTAACACCTTGGCATCGATTCGGCTATGCAGCGGCTAATGCAGCAATTCTTGAAGCAACAGAAGGTTTCTCAGTGATTCATATAGTTGATTTGAGTTCAACTCATTGCATGCAGATTCCTACATTAATCGATGCTATCGCTAATCGCCATGAAGTTGCTCCTTTAATCAAACTCACTGTTTCTGATCATGCTAATAACAACAGTGATCAACTTATTCCACCTAAACTTGATCTTTCTTATGAAGAATTAGGTTCTAAGTTGGTGAATTTCGCTAGATCGAAAAACGTGACATTGGAATTCAGAGTAGTTTCTTCAAGTTACACAAATGGTTTTGCTTCTTTGATTGAACATTTGAGAGTTCAACGTTTGGTTTATTCAGGTGAAGCTTTGGTTATAAATTGTCACATGATGCTTCATTATATTCCTGATGAAACCCTATCAAATTCAAACTCTTATGTTTATGATTCTATGTCTTCTACTACTGCTGCTGCTGCTACTACTGTTACTACTACGTCTCTGAGATCGTTGTTTCTTAACGCGCTTCGAGGTTTAGATCCAACACTTGTTATTTTAGTAGATGAAGATGTTGATTTAACTTCAAATAATTTGGTTAGTAGATTAAGGTCAGCATTTAATTATCTATGGATACCTTATGATACTGTGGATACATTTCTGCCACGTGGAAGTAAACAAAGGCAATGGTATGAAGCCGATATTTGTTGGAAGATTGAGAATGTGATAGCTCATGAAGGTGTTCAAAGAGTTGAGAGAGTTGAAACTATAGGAAAATGGGAACAAAGAATGAGAAATGCTAATTTTCAAGGGATTGGATTTGGTGAAGAATGTGTTGGTGAGGTGAAAGCTATGCTTGATGAACATGCTGCTGGATGGGGATTGAAGAAAGAAGATGAGCATATTGTGCTTACTTGGAAAGGACATAATGTTGTTTTTGCTTCTGCTTGGTTGCCTGCTTAA 1413 0.3744 MMQFTHSLPYLHQTTTTFSNHSSSMNKNNQVPQDKTTKPWFPTSKALTTFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTNRAAKTGTCKMLVEQVYSNTHNNLNIDTHRFSVIELANFVDLTPWHRFGYAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVAPLIKLTVSDHANNNSDQLIPPKLDLSYEELGSKLVNFARSKNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSNSNSYVYDSMSSTTAAAATTVTTTSLRSLFLNALRGLDPTLVILVDEDVDLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVETIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3672 470 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 468 IPR005202 -
Mal5g3672 470 MobiDBLite consensus disorder prediction 19 38 - -
Mal5g3672 470 Pfam GRAS domain family 56 467 IPR005202 -
Mal5g3672 470 ProSiteProfiles GRAS family profile. 47 468 IPR005202 -
Mal5g3672 470 PANTHER SCARECROW-LIKE PROTEIN 32 25 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3672 Mal-Chr5 104092698 104094110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3672 41 469 GRAS Transcription Factor Family AT3G49950 56.881 8.69e-173 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g3672 GRAS 8.3e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3672 - - cam:101509453 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3672 5 104092698 104094110 Mal5g3672 5 104092698 104094110 ECH