Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3666 ATGCGCACGAATAAGCAGCAAGCACCTCACTTACACCTCCGTTTGTTACTAGTGTACACCTTGATTACCTTACGTGCGCCGGTAGCGCAACCTCCTAACGTGCGCATACCGACCCAATCCATCGAATCTAATACCACCACCACTATCGTTAATCACCACCACACTTCTCAGATCTCATCAAACTTCAATCTCCAATCAATGTCGAAAGCTCGCGTCTACACCGATGTCAATGTTATTCGCCCTAAAGAGTATTGGGACTATGAATCTCTCACTGTTCAATGGGGTGATCAAGATGATTATGAGGTTGTACGAAAAGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAAGGCATAAATGTTAACAGCAATGAGCGCTGTGTTATCAAGATTCTCAAGCCTGTCAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTTCAGAACCTTTGTGGGGGCCCAAACATTGTCAAGCTTCTTGATATTGTCAGAGACCAGCACTCTAAAACTCCAAGTTTAATATTTGAGTATGTCAACAGTACAGATTTTAAAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTATTACATTTATGAGCTTCTTAAGGCCTTGGACTACTGCCATTCTCAAGGCATAATGCATAGAGATGTCAAACCACACAATGTTATGATAGATCATGAATTGCGAAAACTCCGCTTAATTGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAAGAGTATAATGTCCGTGTGGCTTCAAGATACTTTAAAGGCCCCGAACTTCTAGTTGATTTGCAAGACTATGATTACTCCTTAGACATGTGGAGCCTTGGCTGCATGTTTGCCGGAATGATATTTCGCAAGGAACCATTCTTTTACGGTCATGACAACCACGACCAGCTTGTAAAAATAGCTAAGGTGCTTGGGACTGATGAACTAAATGCATATCTGAATAAGTATCATCTGGAGCTAGATCCTCAACTTGATGCACTAGTTGGAAGGCACAGTCGCAAACCTTGGTCTAAATTTATCAATGCAGATAATCAGCATCTTGTGTCTCCTGAGGCAATCGATTTTCTTGATAAGCTCCTTCGATATGACCACCAGGACAGGCTAACAGCAAGAGAAGCAATGGCACATCCGTATTTCTCTCAGGTAAGGGCAGCAGAAAGTAGCAGAATGAGGACACAGTAA 1200 0.4175 MRTNKQQAPHLHLRLLLVYTLITLRAPVAQPPNVRIPTQSIESNTTTTIVNHHHTSQISSNFNLQSMSKARVYTDVNVIRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRTQ* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3666 399 Gene3D Phosphorylase Kinase; domain 1 100 176 - -
Mal5g3666 399 SMART serkin_6 100 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3666 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Mal5g3666 399 CDD STKc_CK2_alpha 81 385 IPR045216 GO:0004674|GO:0006468
Mal5g3666 399 ProSiteProfiles Protein kinase domain profile. 100 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3666 399 Pfam Protein kinase domain 100 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3666 399 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Mal5g3666 399 SUPERFAMILY Protein kinase-like (PK-like) 71 389 IPR011009 -
Mal5g3666 399 PANTHER CASEIN KINASE II SUBUNIT ALPHA 6 399 IPR045216 GO:0004674|GO:0006468
Mal5g3666 399 Gene3D Transferase(Phosphotransferase) domain 1 177 385 - -
Mal5g3666 399 PANTHER CASEIN KINASE II SUBUNIT ALPHA-3 6 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3666 Mal-Chr5 103960915 103965656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3666 98 385 Core Cell Cycle Gene Families AT1G76540 29.450 9.08e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Mal5g3666 Pkinase 4.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3666 K03097 - gmx:100820471 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3666 5 103960915 103965656 Mal5g3666 5 103960915 103965656 ECH