Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3654 ATGACCTTCCTTAAGGAGAGCAATGACAATGAAAAAGCCTCAATCAATAAACAAAATCTTGATGATGAATCACATAACATAGGAGAATGGTTGAGTTTAGGAATCAAAGAAAACATTCCTCTACACTCAGATTCTCAATCTTCAAAACCTCTTCACAACAAGGTATTTTCATGCAACTTCTGCATGAGAAAATTTCTTAGTTCACAAGCATTAGGGGGTCACCAAAATGCACACAAAAGGGAAAGAGAAGCAGCTAGAAGTTACCAATTATCTCAAAATTCTTTGGTAGCTCGGTCACTAGGAATCCAACCTCATTCTCTTGTGCACAAGTCAAATAGAGAAAGAGCTGCTACTATGGTGGCACCTCGATTCAATAATATTAATGCCAATTCTATTATTGGAATGACATGGACACCCCTTGTTCTTGAACATGCTGGGGATTTTGTATGGCATGGAAGCTTTCGAATGCAAGAATCAGATAAACATAAGCTTGACCTAAATCTTCGGCTTTAA 513 0.3762 MTFLKESNDNEKASINKQNLDDESHNIGEWLSLGIKENIPLHSDSQSSKPLHNKVFSCNFCMRKFLSSQALGGHQNAHKREREAARSYQLSQNSLVARSLGIQPHSLVHKSNRERAATMVAPRFNNINANSIIGMTWTPLVLEHAGDFVWHGSFRMQESDKHKLDLNLRL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3654 170 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Mal5g3654 170 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Mal5g3654 170 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 170 - -
Mal5g3654 170 SUPERFAMILY beta-beta-alpha zinc fingers 52 83 IPR036236 -
Mal5g3654 170 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g3654 170 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 170 - -
Mal5g3654 170 Gene3D Classic Zinc Finger 34 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3654 Mal-Chr5 103749595 103750107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3654 31 155 C2H2 Transcription Factor Family AT1G24625 39.568 1.13e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3654 - - ccaj:109809498 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3654 5 103749595 103750107 Mal5g3654 5 103749595 103750107 ECH