Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal5g3643 | ATGGATCGGATCAAAGGTCCATGGAGCCCCGAAGAAGACGAATCCTTACAGAAACTCGTTGATCGATACGGTCCACGAAACTGGTCACTCATCAGCCGTGCTATTCCAGGCCGGAGTGGTAAATCCTGCAGGCTCAGATGGTGTAATCAGCTTTCTCCACAAGTTGAGCATCGGGCTTTTTCTCCTGAAGAAGATAATATCATTATCAGAGCCCATGCTCAGTTCGGTAACAAATGGGCTACAATAGCCCGATTGTTATCGGGCCGAACCGATAACGCTATCAAAAATCACTGGAACTCCACTCTCAAACGGAAGTGCTCGTCGTTCATTGGTTCCGATGATCGGGATTTCAATCCTCAGCCGTTGAAACGGTCTGCTAGCGTCGGTGCTCCGGGGAGTCCTTCTGGTTCTGATTTGAGCGATTCCGGTACACACGCCAACGTTTTTCGTCCTGTTCCGATTCGTTTGGCTGTGGAAACAACATCGGAACCGGAACCGGAGCCGGTGGAGGAGGATGATGGTCCGTTAACTTCTCTGTCGCTCTCTCTTCCAGGTGTGGATACTGCTGCGGCGGCGGTGCCGATTAGTCCGTCTCCGATGAGCGCTGTAACTGCTTCGGTGGCGGCGAAAGTGGCGAAAGTTTCGGAAGAAGCTGGAATTGGAGCGTTGAATTTGAGTGGTGAATTTATGGCGGTTATGCAAGAGATGATAAAGAATGAAGTGAGGAGTTATATGGAAGAGAGAAATGGAATGTGTTTTCAAGGTGTGGATAGGCTTAGGAATGTTTCTGCTAAGCCAATTGGGATTAACAGGGTTGATGGGTGA | 825 | 0.4958 | MDRIKGPWSPEEDESLQKLVDRYGPRNWSLISRAIPGRSGKSCRLRWCNQLSPQVEHRAFSPEEDNIIIRAHAQFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSFIGSDDRDFNPQPLKRSASVGAPGSPSGSDLSDSGTHANVFRPVPIRLAVETTSEPEPEPVEEDDGPLTSLSLSLPGVDTAAAAVPISPSPMSAVTASVAAKVAKVSEEAGIGALNLSGEFMAVMQEMIKNEVRSYMEERNGMCFQGVDRLRNVSAKPIGINRVDG* | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal5g3643 | 274 | Gene3D | - | 4 | 56 | - | - | |
Mal5g3643 | 274 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 57 | 106 | IPR017930 | - | |
Mal5g3643 | 274 | PANTHER | MYB TRANSCRIPTION FACTOR | 2 | 247 | - | - | |
Mal5g3643 | 274 | CDD | SANT | 7 | 49 | IPR001005 | - | |
Mal5g3643 | 274 | ProSiteProfiles | Myb-like domain profile. | 1 | 51 | IPR001005 | - | |
Mal5g3643 | 274 | PANTHER | MYB PROTEIN-RELATED | 2 | 247 | - | - | |
Mal5g3643 | 274 | SUPERFAMILY | Homeodomain-like | 2 | 98 | IPR009057 | - | |
Mal5g3643 | 274 | ProSiteProfiles | Myb-like domain profile. | 52 | 102 | IPR001005 | - | |
Mal5g3643 | 274 | SMART | sant | 56 | 104 | IPR001005 | - | |
Mal5g3643 | 274 | SMART | sant | 4 | 53 | IPR001005 | - | |
Mal5g3643 | 274 | CDD | SANT | 59 | 102 | IPR001005 | - | |
Mal5g3643 | 274 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 1 | 55 | IPR017930 | - | |
Mal5g3643 | 274 | MobiDBLite | consensus disorder prediction | 130 | 144 | - | - | |
Mal5g3643 | 274 | MobiDBLite | consensus disorder prediction | 110 | 146 | - | - | |
Mal5g3643 | 274 | Pfam | Myb-like DNA-binding domain | 8 | 65 | - | - | |
Mal5g3643 | 274 | Gene3D | - | 58 | 118 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal5g3643 | Mal-Chr5 | 103400782 | 103401606 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal5g3643 | 1 | 245 | MYB Transcription Factor Family | AT4G37260 | 55.273 | 1.33e-87 | 262 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Mal5g3643 | Myb_DNA-bind_6 | 6e-17 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal5g3643 | K09422 | - | gmx:100806145 | 328.176 |