Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3638 ATGTCTCAAGCCCAACAACAACCTTCCTTTCTCGACACCCTTCTCTGTGAAGAACAAAACACCTTCGAAGATGATTCCGAAACCATTATCAACGACCCATCTGAGAAAAAGCTACAATCTTTATCGATTTTGTTCAACAATGATATGTTCTGGGAAGACGATGAAGTTCTTTCGTTAATTATGAAAGAGAAAGAAACCCATTTGAGTTATGTTGATGATGGATCTTTGGATGAAACTCGTGTTGAAGGTGTGAACTGGGTTTCTAAAGTTTGTGCTCATTTTGGGTTTTCTACTTTGACCAATGTTCTTGCTGTGAACTACTTTGATAGATTTATTACTAGTTTGAAGTTTCAAAAGGATAAACCTTGGATGACTCAGCTCACTGCTGTTGCTTGTTTGTCTCTTGCTGCTAAAATGGAAGAAACCCATGTGCCACTTCTGTTGGATTTTCAAGTTGAGGAATCTAGATTTGTGTTTGAAGCTAAAACTATACAAAGAATGGAGCTTTTGGTGTTGTCTACTTTGAAATGGAGGATGCATCCAGTGACACCAATTTCTTTCTTTGAACACATTGTTAGAAGACTTGGTTTGAAGAGCCGTTTGCATTGGGAGTTTATGTGGCGTTGTGAGAGGGTTCTTCTTCATGTCATTGTTGATTCAAAGGTTATGATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACAATGATCCATGTAATTAAAGAGATTGAACCATTTAATGCAACTGTGTACATTGATCAACTCTTGGGTTTACTAAAGATTAGTGAGGAACAAGTGAACCAGTGCTATAAACTTATGCTGAAGTTATTAGTATGCGATGATGGCATTTACAGTCTTCACCAGAAACGTAAGCGCGTATCTGAACCAAGTAGTCCGGGTGGTGTCATTGATGCATCTTTCAGTTGCGATAGCTCAAATGATTCATGGACTGTGGGATCGTCGGTTTCACTTTCACTTCAGCCGATGTTCAAGAGGAGCAGAGCTCAAGACCAGCAGATGCGATTGCCTTCGGTTAATCGTGTGTCTATTGATGTTCTTAATAGCCCTCGTTAA 1074 0.3939 MSQAQQQPSFLDTLLCEEQNTFEDDSETIINDPSEKKLQSLSILFNNDMFWEDDEVLSLIMKEKETHLSYVDDGSLDETRVEGVNWVSKVCAHFGFSTLTNVLAVNYFDRFITSLKFQKDKPWMTQLTAVACLSLAAKMEETHVPLLLDFQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFMWRCERVLLHVIVDSKVMMSYLPSTLAAATMIHVIKEIEPFNATVYIDQLLGLLKISEEQVNQCYKLMLKLLVCDDGIYSLHQKRKRVSEPSSPGGVIDASFSCDSSNDSWTVGSSVSLSLQPMFKRSRAQDQQMRLPSVNRVSIDVLNSPR* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3638 357 Pfam Cyclin, N-terminal domain 74 179 IPR006671 -
Mal5g3638 357 PANTHER CYCLIN-D3-2 3 341 - -
Mal5g3638 357 Gene3D - 181 271 - -
Mal5g3638 357 SUPERFAMILY Cyclin-like 50 180 IPR036915 -
Mal5g3638 357 SUPERFAMILY Cyclin-like 183 285 IPR036915 -
Mal5g3638 357 SMART cyclin_7 85 173 IPR013763 -
Mal5g3638 357 SMART cyclin_7 190 275 IPR013763 -
Mal5g3638 357 PANTHER CYCLINS 3 341 IPR039361 -
Mal5g3638 357 SMART Cyclin_C_2 182 311 IPR004367 -
Mal5g3638 357 Pfam Cyclin, C-terminal domain 182 279 IPR004367 -
Mal5g3638 357 Gene3D - 77 180 - -
Mal5g3638 357 CDD CYCLIN 79 172 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3638 Mal-Chr5 103211195 103212709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3638 3 347 Core Cell Cycle Gene Families AT5G67260 50.137 2.96e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3638 K14505 - gmx:100785030 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1178 2 13802082 13803424 Mal5g3638 5 103211195 103212709 ECH
Mal5g3638 5 103211195 103212709 Mal5g3638 5 103211195 103212709 ECH