Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3631 ATGGCCGTGGAACTCATGACAGGCTACAACAACAACAGAACCGAAGCTTTCACTACCAAAGCTGAAGAAAATGCTGTCCAAGAAGCAGCTTCTGGTTTAGAAAGTGTTGAAAAACTCATCAAACTTCTCTCAGAAGCACGTCACAAATACCAACCTTCTTCATCTTCTTCTTCCTCCTTTTCACCTTCAAATCCCAATAACAACAACAACTCTTCCATGGAAATTGAAAGAGATTGCAAAGCTGTTGCAGACATAGCTGTTTCCAAGTTCAAACGTGTTATTTCACTTCTTGAAAAAACCAGAACTGGTCATGCTCGTTTCAGAAAAGCACCTTTACCACAACCACCACAAAACCAACAAATTCAACCTTCTGAGCCAATGATTTTCAACGCTACACCTTTGCAACAGATTCCACCAACAATTTCTACTACCCTTCACCGTCCTATAATCAAAAGAAATGATTCTTCAAGGACTCTTAATTTTTCATACTCTTCTGCTGCTAATTCTTTCATTTCTTCACTCACCGGCGACGACAACAAACAACCGTCGATGTCGTCGCCGGCGGGTGCTTTTCAGATCACAAATCTGTCTCATGTTTCATCTGTTGGTAAGCCACCACTTTCTTCTTCTTCCTTGAAAAGGAAGTGTAGCTCTGAAACTTTGGGTTCTGGAAAGTGTGGTAGTTCTTCTAGCCGTTGTCATTGTTCCAAAAAAAGTAGGAAAATGAGATTGAAGAGGGTTGTTAGGGTTCCTGCTATTAGCTTGAAGATGGCTGATATTCCACCAGATGATTACTCTTGGAGAAAATATGGTCAGAAACCTATTAAAGGTTCACCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGTTGTCCAGCACGCAAACATGTAGAAAGAGCTCTTGATGATGCTTCTATGCTGGTAGTCACTTATGAAGGAGAGCACAATCACTCACTTTCTGCAGCTGATGCTAGTAATCTCATTTTAGAATCATCATAA 1005 0.41 MAVELMTGYNNNRTEAFTTKAEENAVQEAASGLESVEKLIKLLSEARHKYQPSSSSSSSFSPSNPNNNNNSSMEIERDCKAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQPPQNQQIQPSEPMIFNATPLQQIPPTISTTLHRPIIKRNDSSRTLNFSYSSAANSFISSLTGDDNKQPSMSSPAGAFQITNLSHVSSVGKPPLSSSSLKRKCSSETLGSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADASNLILESS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3631 334 Pfam Plant zinc cluster domain 213 259 IPR018872 -
Mal5g3631 334 SUPERFAMILY WRKY DNA-binding domain 258 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g3631 334 Gene3D WRKY domain 248 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g3631 334 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g3631 334 MobiDBLite consensus disorder prediction 50 72 - -
Mal5g3631 334 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g3631 334 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 334 IPR044810 GO:0003700
Mal5g3631 334 Pfam WRKY DNA -binding domain 263 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g3631 334 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 17 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3631 Mal-Chr5 103059063 103060604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3631 22 319 WRKY Transcription Factor Family AT2G24570 44.479 3.34e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g3631 WRKY 9.7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3631 5 103059063 103060604 Mal5g3631 5 103059063 103060604 ECH
Mal5g3631 5 103059063 103060604 Mal6g1346 6 24044352 24046145 PCT