Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3627 ATGCATCATTTAATAACATTGTTCATCCCTATAATCTACTTCTTCACCTTCACATTATCTTCCTCTACAAACACCACACTCTCTCAAGACGCAGTATCTTTACTTTCATTCAAACAAAACGCAGACCAAACCAACAAACTCCTCTACACACTAAACGAACCATACGACTACTGCGAATGGCAAGGTGTCAAATGCGCACAAGGCAGAGTTGTACGCTACGTTGTTCAATCCTTAAACCTCACCGGTTTTTTCTCACCCAACACACTAACCCGGCTCGACCAACTCCGAGTCATGAGTCTCCGTAACAACTCCCTCTCCGGACCTATTCCAGATCTTTCCTCACTCACTAACCTCAAATCACTCTTCCTCGACCGGAATAATTTCTCCGGTTCATTCCCTCCTTCTCTCATCTTCCTCCACCGGCTCACCACTCTTTCTCTTTCACATAACAACCTCTACGGTTCACTTCCGGTTCAGTTAACTCTCCTCGACCGTCTCATTATTCTTCGACTCGATTCAAATTCATTCACCGGTTCTCTTCCTTCGCTTAACCAAACTGATTTAAAAGTTTTCAATATCTCTGCAAATAACCTCACCGGTCCGGTTCCTGTTACAGAAACTCTTTCACGGTTTAAACCGGTTTTGTTTTCAGATAACCCGGGTTTATGTGGTGAGATTATTCATAAACAATGTGGTCATCGTTCTAGATTCTTCGATGGTTCATCAAACGCCACCGGTTCTTCCGCCGCGCCGTTGAGTCAAAGCGAGGAATCACAAGGAATCGTGGTGGTTCCTTCTTCGAAAAACAAGAAAAACCACAAAAAAACCGGTTTGATTCTCGGGTTCATTGTTGGTTTTACATTTCTAGCTGTTTTTACTGTTCTTGTAATTGCATTGGTTAGAAAACAGCACACCCGAGAAAAATCCGAGTCATCCGAAAAGTTACCGTCTAATACTCTACCGGCCATGGAGGTAATGGAAGTGAGAAATGAGATGGAAAATGAAACGAAGGTGAAGAAAATGGAAGAAGCGCATAAGAGTGGAAAGTTAGTGTTCTGCTGTGGGGAGGTGCAGGAGTATACACTAGAGCAGCTGATGAGGGCTTCGGCGGAGCTTTTAGGAAGAGGGAGTGTGGGGGCGACTTACAAGGCGGTGATGGATTCACGGTTGATATTGACGGTAAAGAGGTTGGATGCCGGAAAAACTGGTGTGACGAGTGGGGAGGATTTTCAGAAGCATATGGAGATGGTGGGGAGGCTTTGTCATCCGAATTTGGTTCCTTTGAAGGCTTTTTTTCAGGCTAAAGGAGAAAGGCTTGTGATTTATGAGTATCAACCTAATGGAAGCCTCTTCAATCTAGTTCATGGTTCAAGACCAGCGAGAGCGAAGCCGCTGCATTGGACATCATGCTTAAAAATAGCAGAAGATGTAGCACATGGACTTGCTTACATACATCAAGTTTCGTCTTTGATTCATGGCAATCTAAAATCCTCCAATGTCCTTCTTGGAGGGGACTTTGAAGCTTGCGTTACGGACTATTGTTTGGCCTTCCTAACAGATTCTTCATTGACAGAAGATCCTGATTCTGCCGCCTACAAGGCGCCAGAGGTTCGAAAATCTAACCGCAGGGCGACTTCAAAGTCTGATGTGTATGCTTTTGGTGTGTTGTTGTTGGAGCTTTTGACGGGTAAGCATCCTTCCAAACATCCTTTCCTTGCGCCAACGGATTTGCAAGATTGGGTTAGAGCAATGAGGGACGATGATTTTAGCGAAGATAACCGGCTAGAAATGCTCACTGAGGTTGCCAGTATTTGCAGTGCGACCTCGCCTGAGCAGAGGCCAGCTATGTGGCAAGTTCTTAAGATGATACAAGGAATAAAGGATAGTGTTTCAATGGAGGACACTGCAATCACTGGACTCTCATAG 1926 0.447 MHHLITLFIPIIYFFTFTLSSSTNTTLSQDAVSLLSFKQNADQTNKLLYTLNEPYDYCEWQGVKCAQGRVVRYVVQSLNLTGFFSPNTLTRLDQLRVMSLRNNSLSGPIPDLSSLTNLKSLFLDRNNFSGSFPPSLIFLHRLTTLSLSHNNLYGSLPVQLTLLDRLIILRLDSNSFTGSLPSLNQTDLKVFNISANNLTGPVPVTETLSRFKPVLFSDNPGLCGEIIHKQCGHRSRFFDGSSNATGSSAAPLSQSEESQGIVVVPSSKNKKNHKKTGLILGFIVGFTFLAVFTVLVIALVRKQHTREKSESSEKLPSNTLPAMEVMEVRNEMENETKVKKMEEAHKSGKLVFCCGEVQEYTLEQLMRASAELLGRGSVGATYKAVMDSRLILTVKRLDAGKTGVTSGEDFQKHMEMVGRLCHPNLVPLKAFFQAKGERLVIYEYQPNGSLFNLVHGSRPARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLIHGNLKSSNVLLGGDFEACVTDYCLAFLTDSSLTEDPDSAAYKAPEVRKSNRRATSKSDVYAFGVLLLELLTGKHPSKHPFLAPTDLQDWVRAMRDDDFSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDTAITGLS* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3627 641 SUPERFAMILY L domain-like 28 224 - -
Mal5g3627 641 SUPERFAMILY Protein kinase-like (PK-like) 371 627 IPR011009 -
Mal5g3627 641 Gene3D Ribonuclease Inhibitor 140 225 IPR032675 -
Mal5g3627 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 637 - -
Mal5g3627 641 Pfam Protein kinase domain 370 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3627 641 Gene3D Phosphorylase Kinase; domain 1 330 444 - -
Mal5g3627 641 ProSiteProfiles Protein kinase domain profile. 367 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3627 641 PANTHER LRR RECEPTOR-LIKE KINASE 8 637 - -
Mal5g3627 641 SMART serkin_6 367 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3627 641 Gene3D Ribonuclease Inhibitor 29 139 IPR032675 -
Mal5g3627 641 Gene3D Transferase(Phosphotransferase) domain 1 446 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3627 Mal-Chr5 103004501 103007719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3627 27 634 Receptor kinase-like Gene Family AT3G50230 54.054 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal5g3627 Pkinase 1.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3627 - - gmx:100783086 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3627 5 103004501 103007719 Mal5g3627 5 103004501 103007719 ECH