Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3622 ATGGCTTTCACAATTTCATATATTTTTCTAGCCTCCTTGCTATTTCCCTTCCAATGTTCATATTCTTTATCATCATTGAACAAAGGCTCCTCTCTGTCAGTAGAGAAACATGCAGAAGATGTAATTGTCTCTTCAAATGGAACATTCTCAGCTGGCTTCTTTCAAGTTGGTGAAAATGCTTTTTCCTTTGGCATATGGTTCACTGAGCTGCAGCCTCACAGTCACAACCCCGCCACTATTGTTTGGATGGCAAACCGTGACAACCCTGTAAATGGTAAGCTCTCGATGCTTTCCCTCTTAAAAACGGGTAATATCATTTTGCTTGATGCCGGACAAGACAACATTTGGTCTTCAAACACAGAATCAAACACTCCATTAGAGTTGTATCTCAAAGAAGATGGCAATCTTGTGTTACGTGAGGTTCAAGGAACTACCATCTTATGGCAAAGCTATGATTTTCCAACAAATACTCTCCTTCCTAATCAACCTCTCACTAGATACACAAAACTTGTTTCTTCAAGAAGCCAGAGTAATCATTCTTCTGGCTTCTATAAGTTTTTCTTTGATGATAACAATATTATTCGTCTCGAATATGATGGTCCTGATGTTTCTAGCACATATTGGCCACCACCTTGGTTGTTAAGCTGGGAAGCTGGAAGGTTCAATTATAATAGTAGTAGAGTTGCTTTGTTGGATTCTCTTGGAAAGTTTATTTCATCTGATAATTACATTTTTTCCACATATGATTATGGTATGGTTATGCAAAGAAGATTAACCATGGATTCTGATGGTAACATTCGTGTTTACAGTCGAAAAAACTTGTCAGAAAATTGGTATATTTCATGGCAAGTCATATCTGATACTTGCATCATTCATGGAATTTGTGGTGAAAATAGCACTTGCAACTATCATCCAAAAAAAGGTAAGAAATGCTCTTGTTTTCCAGGGTATAAAGTGAAGAACCATAATGATTGGTCTCAAGGTTGTGAACCTATGTTTGATTTTACTTGCAATAGAAGTAATTCTACCTTTTTAAAATTACATGGTTATGAGCTCTATGGTTATGACATTAATTTTTTTCAAAATATTACCTACAAAAATTGTGAGAGTTTATGTTTACAAGATTGTAACTGTAAAGGATTCCAATACACATATGTAGAGGACAAAGGCATCTTCAAATGTTATACAAAGCTACACTTGTTGAATGGGAGGCATTCACCAAGTTTTCGAGGAACAACTTACTTGAGACTTCCAAAAGGTAATAACTTCACTAAAGAAGAGTCTATGAGTGTAAAAGATCATGTTTGTTTGGTACAACTTCACAAAGACTATGCCGAAAAACCAACAAATAATATGGTGAAGTTTTTCCTGTGGCTTTCAATTGCAGTTGGTTGTTTTGAATCAGTTTGCTTTTTTCTGGTTTTTGTTTTTTTATTCATGACCAAGAAAAAAACTACTTCAGATCAAAATAGCTATCATCATACATTATTTGGATTCAGAAGATATAGTTACTCGGAGTTGAAGGTAGCAACCAAAAATTTCAGTAATGAGATTGGAAGAGGTGGAGGAGGGGTTGTATACAGAGGTACATTGCCAGATCAAAGACAAGCAGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAAGGAGAAGGAGAGTTTCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACAAGAACTTGATTGAAATGTGGGGATATTGTGTTGAAGGTAAACATAGGCTTTTGGTATATGAGTACATGGAGAATGGTTCTTTAGCAGACAATCTTTCATCCCAAACTAACACACTTGATTGGAGTAAAAGGTATGATATTGCTTTAGGAACATCTAGAGTTCTAGCTTATCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCTCAAAATATACTTCTTGATTCTAACTATCAGCCCAAGTTAGCAGACTTTGGATTGTCTAAGCTGAAAAATAGAAACAATCTCAATAGTAATTTAGAATTCTCAATGATTAGAGGAACAAGAGGATATATGGCTCCTGAATGGGTTTTCAATTTACCAATAACATCTAAAGTGGATGTTTATAGTTATGGGATTGTTGTGTTGGAGATGATAACTGGAAAAAGTTCAACAATGATGAATATAGAAGGAGTTGATGGAGAAGTGGCATATAATGGAAGGTTGGTAACTTGGGTAAGAGAGAAAAAGAGGAGTACATGTTGGGTGGAAGAAATTATGGATCCTGCAATGGTGAATAATTGTGATTTAAGTAAGATGGAAATTTTGGCTAGAGTTGCTTTGGAGTGTGTAGAGGAAGATAGGGATATTAGGCCTAATATGAGCCAGGTGGTTGAAATGCTTGAAAACAATGAAAGAGTTGCTAAGTGA 2406 0.3574 MAFTISYIFLASLLFPFQCSYSLSSLNKGSSLSVEKHAEDVIVSSNGTFSAGFFQVGENAFSFGIWFTELQPHSHNPATIVWMANRDNPVNGKLSMLSLLKTGNIILLDAGQDNIWSSNTESNTPLELYLKEDGNLVLREVQGTTILWQSYDFPTNTLLPNQPLTRYTKLVSSRSQSNHSSGFYKFFFDDNNIIRLEYDGPDVSSTYWPPPWLLSWEAGRFNYNSSRVALLDSLGKFISSDNYIFSTYDYGMVMQRRLTMDSDGNIRVYSRKNLSENWYISWQVISDTCIIHGICGENSTCNYHPKKGKKCSCFPGYKVKNHNDWSQGCEPMFDFTCNRSNSTFLKLHGYELYGYDINFFQNITYKNCESLCLQDCNCKGFQYTYVEDKGIFKCYTKLHLLNGRHSPSFRGTTYLRLPKGNNFTKEESMSVKDHVCLVQLHKDYAEKPTNNMVKFFLWLSIAVGCFESVCFFLVFVFLFMTKKKTTSDQNSYHHTLFGFRRYSYSELKVATKNFSNEIGRGGGGVVYRGTLPDQRQAAIKRLNEAKQGEGEGEGEFLAEVSIIGRLNHKNLIEMWGYCVEGKHRLLVYEYMENGSLADNLSSQTNTLDWSKRYDIALGTSRVLAYLHEECLEWILHCDIKPQNILLDSNYQPKLADFGLSKLKNRNNLNSNLEFSMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSSTMMNIEGVDGEVAYNGRLVTWVREKKRSTCWVEEIMDPAMVNNCDLSKMEILARVALECVEEDRDIRPNMSQVVEMLENNERVAK* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3622 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 798 - -
Mal5g3622 801 Pfam PAN-like domain 337 397 IPR003609 -
Mal5g3622 801 CDD PAN_AP_plant 336 418 - -
Mal5g3622 801 CDD STKc_IRAK 530 795 - -
Mal5g3622 801 SMART ntp_6 339 417 IPR003609 -
Mal5g3622 801 SMART serkin_6 512 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3622 801 Pfam S-locus glycoprotein domain 235 320 IPR000858 GO:0048544
Mal5g3622 801 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 798 - -
Mal5g3622 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 209 IPR036426 -
Mal5g3622 801 Gene3D - 22 153 IPR036426 -
Mal5g3622 801 Pfam Protein kinase domain 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3622 801 SUPERFAMILY Protein kinase-like (PK-like) 488 794 IPR011009 -
Mal5g3622 801 Pfam D-mannose binding lectin 79 167 IPR001480 -
Mal5g3622 801 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Mal5g3622 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Mal5g3622 801 ProSiteProfiles Bulb-type lectin domain profile. 17 151 IPR001480 -
Mal5g3622 801 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Mal5g3622 801 Gene3D Transferase(Phosphotransferase) domain 1 591 801 - -
Mal5g3622 801 PIRSF SRK 1 801 IPR024171 GO:0004674
Mal5g3622 801 SMART blect_4 33 154 IPR001480 -
Mal5g3622 801 CDD B_lectin 42 154 IPR001480 -
Mal5g3622 801 Gene3D Phosphorylase Kinase; domain 1 477 590 - -
Mal5g3622 801 ProSiteProfiles Protein kinase domain profile. 512 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3622 Mal-Chr5 102836063 102838831 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3622 457 794 Receptor kinase-like Gene Family AT5G45780 36.023 1.96e-62 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal5g3622 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3622 - - gmx:100784287 1112.06