Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3620 ATGTATAATGAACCCAAACGTAAGCTCTCTAAGATTTCCCTCTTAAACACGGGTAATATCGTTTTGCTTGATGCCGGACAAGACAACATTTGGTCTTCAAACACGGAATCAAACACTCCATTAGAGTTGTTTCTCAAAGAAGATGGCAATCTCGTGTTACGTGAGCTTCAAGGAACTACCATCTTGTGGCAAAGTTATGATTTTCCAACAAATACTCTCCTTCCTAATCAACCTCTCACTAGATACACAAAACTTGTTTCTTCAAGAAGCCAGAGTAATCATTCTTCTGGCTTCTATAAGTTTTTCTTTGATGATGACAATATTATTCGTCTTGTATATGATGGTCCTGATGTTTCTAGCACATATTGGCCACCATCTTGGTTGTTAATCTGGGAAGCTGGAAGGTTCAATTATAATAGTAGTAGAGTTGCTTTGTTGGATTCTCTTGGAAAGTTTATTTCATCTGATAATTACAATTTTTCCACATATGATTATGGTATGGTTATGCAAAGAAGATTAACCATGGATTCTGATGGTAACATTCGTGTTTACAGTCGAAAAAACTTGTCAGAAAATTGGTATATTTCATGGCAAGTCATATCTGATACTTGCATGATTCATGGAATTTGTGGTGAAAATAGCACTTGCAACTATCATCCAAAAAAAGGTAAGAAATGCTCTTGTTTGCCAGGGTATAAAGTGATGAACCATAATGATTGGTCTCAAGGTTGTAAACCTATCTTTGATTTTACTTGCAATACAAGTCATTCTACCTTTTTAAAATTACCAGGTTTTGAGTTCTCTGGTTATGACAGTAATTTTTTTCAAAATTTTACCTACAAAAATTGTGAGAGTTTATGTTTACAAGATTGTAACTGTAAAGGATTCCAATACACATATGTAGAGGACGAAGGCATCTTCAAATGCTATACAAAGCTATACTTGTTTAATGGGAGGTATTCACCAAGTTTTCGAGCAACAACAACTTACTTGAGACTTCCAAAAGGTAATAACTTCACTAAAGAAGAGTCTATGAGTGTAAAAGATCATGTTTGTTTGGTGCAACTTCACAAAGACTATGTCAGAAAACCAATAAATCATACAGTGAAGTTTTTTATGTGGCTTTCAGCTGCAGTTGGTTGTTTTGAATCAGTTTGCTTTTTTCTGGTTTTTGTTTTTTTATTCAAGACTACGAAAGAAACTGCTTCAGATCAAAATAGCTATCATCATACATTATTTGGATTCAGAAGATATAGTTACTCGGAGTTGAAGGTAGCAACCAAAAATTTCAGTAATGAGATTGGAAGAGGTGGAGGAGGGGTTGTATACAGAGGTACATTGCCAGATCAAAGACAAGCAGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAAGGAGAGTTTCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACAAGAACTTGATTGAAATGTGGGGATATTGTGTTGAAGGTAAACATAGGCTTTTGGTATATGAGTACATGGAGAATGGTTCTTTAGCAGACAATCTTTCATCCCAAACTAACACACTTGATTGGAGTAAAAGGTATGATATTGCTTTAGGAACATCTAGAGTTCTAGCTTATCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCTCAAAATATACTTCTTGATTCTAACTATCAGCCCAAGTTAGCAGACTTTGGATTGTCTAAGCTGAAAAATAGAAACAATCTCAATAGTAATTTAGAATTCTCAATGATTAGAGGAACAAGAGGATATATGGCTCCTGAATGGGTTTTCAATTTACCAATAACATCTAAAGTGGATGTTTATAGTTATGGGATTGTTGTGTTGGAGATGATAACTGGAAAAAGTTCAACAATGATGAATATAGAAGGAGTTGATGGAGAAGTGGCATATAATGGAAGGTTGGTAACTTGGGTAAGAGAGAAAAAGAGGAGTACATGTTGGGTGGAAGAAATTATGGATCCTGCAATGGTGAATAATTGTGATTTAAGTAAGATGGAAATTTTGGCTAGAGTTGCTTTGGAGTGTGTAGAGGAAGATAGGGATATTAGGCCTAATATGAGCCAGGTGGTTGAAATGCTTGAAAACAATGAAAGAGTTGCTAAGTGA 2148 0.352 MYNEPKRKLSKISLLNTGNIVLLDAGQDNIWSSNTESNTPLELFLKEDGNLVLRELQGTTILWQSYDFPTNTLLPNQPLTRYTKLVSSRSQSNHSSGFYKFFFDDDNIIRLVYDGPDVSSTYWPPSWLLIWEAGRFNYNSSRVALLDSLGKFISSDNYNFSTYDYGMVMQRRLTMDSDGNIRVYSRKNLSENWYISWQVISDTCMIHGICGENSTCNYHPKKGKKCSCLPGYKVMNHNDWSQGCKPIFDFTCNTSHSTFLKLPGFEFSGYDSNFFQNFTYKNCESLCLQDCNCKGFQYTYVEDEGIFKCYTKLYLFNGRYSPSFRATTTYLRLPKGNNFTKEESMSVKDHVCLVQLHKDYVRKPINHTVKFFMWLSAAVGCFESVCFFLVFVFLFKTTKETASDQNSYHHTLFGFRRYSYSELKVATKNFSNEIGRGGGGVVYRGTLPDQRQAAIKRLNEAKQGEGEGEFLAEVSIIGRLNHKNLIEMWGYCVEGKHRLLVYEYMENGSLADNLSSQTNTLDWSKRYDIALGTSRVLAYLHEECLEWILHCDIKPQNILLDSNYQPKLADFGLSKLKNRNNLNSNLEFSMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSSTMMNIEGVDGEVAYNGRLVTWVREKKRSTCWVEEIMDPAMVNNCDLSKMEILARVALECVEEDRDIRPNMSQVVEMLENNERVAK* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3620 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Mal5g3620 715 ProSiteProfiles PAN/Apple domain profile. 252 335 IPR003609 -
Mal5g3620 715 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 8 712 - -
Mal5g3620 715 Pfam S-locus glycoprotein domain 151 234 IPR000858 GO:0048544
Mal5g3620 715 Pfam Protein kinase domain 431 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3620 715 CDD PAN_AP_plant 251 334 - -
Mal5g3620 715 SUPERFAMILY Protein kinase-like (PK-like) 405 708 IPR011009 -
Mal5g3620 715 Pfam D-mannose binding lectin 10 82 IPR001480 -
Mal5g3620 715 Gene3D Transferase(Phosphotransferase) domain 1 505 715 - -
Mal5g3620 715 CDD STKc_IRAK 446 709 - -
Mal5g3620 715 Gene3D - 6 65 IPR036426 -
Mal5g3620 715 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 712 - -
Mal5g3620 715 ProSiteProfiles Protein kinase domain profile. 428 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3620 715 Gene3D Phosphorylase Kinase; domain 1 399 504 - -
Mal5g3620 715 SUPERFAMILY alpha-D-mannose-specific plant lectins 10 124 IPR036426 -
Mal5g3620 715 Pfam PAN-like domain 252 311 IPR003609 -
Mal5g3620 715 ProSitePatterns Protein kinases ATP-binding region signature. 434 456 IPR017441 GO:0005524
Mal5g3620 715 PIRSF SRK 2 715 IPR024171 GO:0004674
Mal5g3620 715 ProSiteProfiles Bulb-type lectin domain profile. 1 66 IPR001480 -
Mal5g3620 715 SMART serkin_6 428 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3620 Mal-Chr5 102818896 102821187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3620 366 709 Receptor kinase-like Gene Family AT5G45780 34.957 2.73e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal5g3620 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3620 - - gmx:100784287 996.112