Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3618 ATGGCATCCATCAAACTCATATCAACCACTACAATTCAAGCACCAAATCACATTAACACCAACTCAACTCAAAAAATCCATTTGACCCCATGGGACCTCTCATCCCTCCAAGTTGAGATGAACCAAAAAGGACTTCTCTTTCACAATCTCCAAAACCCAAAAGACACCTCAAACCTAATCCAACACCTCAAAAACACCCTTTCCTCAACTCTTGCCTTCTTCCCACCCCTCACCGGTCGTCTCATCATTGAACATCAAGAAGACAACACCAAGAACAACAATAACACAACCTCATGTTTCATCCTTTGCAACAACCTAGGTGCATCATTTATAAATGCAATAGCTGAAAACACAAGTGTCTCCGACATTCTTAAACCAAACTATGCTCCTTCCATTGTTCACTCATTTTTTCCATTCAATAAAGTCAAAAACTACGAAGGCACATCAAAACCATTGCTTGCAGTCCAAGTTACTGAATTGATTGATGGTATCTTCATTGGCTTCTCAATCAACCATGTTGTTGTCGATGGTAAGTCGTTTTGGCATTTCATCAATTCATGGTCTGAAATCTCACGTGGTTTTGATCAACCATCGAAACTCCCAACACTTAATCGTTGGTTTCTCAATGACCCAATTGAAATTCCTATAAAATTTCCATTTACAAAGGAGGAAAATCGAGAAAGTACTGACATTGATGATAACTGTCTTCCACCTGAGAGAATTTTCCATTTTACGAAGGAGAAAATTGTGAAACTCAAATCAAAAGCTAACGAAGAGGCTAATACCAACAAAATATCTTCTCTACAAGCACTTTTAACTCATCTTTGGCGAGCTGTGATTCGTTGTCAGAATATTGACCCAGAAGAAGAAATCATGTATTGTTTAGTCATTGATGTTAGAGGCAGAGTTGTTCCACCTTTGCCAGAGAATTACTTTGGAAATGCATTACAAGTTGGTGGTGTGAAAGTGAAAGCAAAGGAATTACTTGTTGAGCAAGGGTTTGGAAAAGTTGCTTTTGAGATGAACAAGTTGATAGGTTCACATTGTGATGATACTGTGAAGAGAAACTACGAAAGTTGGGTGAAAAATCCAATGTTGTTTCAAGGTAGGCTTAGTAGTGTTAAGGCTTTGGCTACTAGTAGTTCTCCAAGGTTTGATGTTTATGGTAATGACTTTGGTTGGGGTAAGCCTGTGGCTGTTAGAAGTGGGGGTGCAAATAAAAGTGATGGAACGATAACTATGTTTAGTGGGCCAGAAGAAGGTAGTATTGATGTTGAAGTTTGTCTTTCTTATGATATTTTGGAGTCTATGGGAAATGATCCTCAATTCATTCATATCTTCTAA 1344 0.3832 MASIKLISTTTIQAPNHINTNSTQKIHLTPWDLSSLQVEMNQKGLLFHNLQNPKDTSNLIQHLKNTLSSTLAFFPPLTGRLIIEHQEDNTKNNNNTTSCFILCNNLGASFINAIAENTSVSDILKPNYAPSIVHSFFPFNKVKNYEGTSKPLLAVQVTELIDGIFIGFSINHVVVDGKSFWHFINSWSEISRGFDQPSKLPTLNRWFLNDPIEIPIKFPFTKEENRESTDIDDNCLPPERIFHFTKEKIVKLKSKANEEANTNKISSLQALLTHLWRAVIRCQNIDPEEEIMYCLVIDVRGRVVPPLPENYFGNALQVGGVKVKAKELLVEQGFGKVAFEMNKLIGSHCDDTVKRNYESWVKNPMLFQGRLSSVKALATSSSPRFDVYGNDFGWGKPVAVRSGGANKSDGTITMFSGPEEGSIDVEVCLSYDILESMGNDPQFIHIF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3618 447 Pfam Transferase family 3 440 - -
Mal5g3618 447 Gene3D - 238 439 IPR023213 -
Mal5g3618 447 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 445 - -
Mal5g3618 447 Gene3D - 2 214 IPR023213 -
Mal5g3618 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3618 Mal-Chr5 102764694 102766037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3618 52 429 Monolignol Biosynthesis Gene Families AT5G48930 28.643 9.41e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3618 - - gmx:100500257 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3618 5 102764694 102766037 Mal5g3618 5 102764694 102766037 ECH