Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3610 ATGGATTGGGTACGAGGAGAAACTGTTGGCAGAGGAAGCTTTGCAACAGTTCATTTAGCAAATTCATCTCAATTTCTTTCTCCGACAGCCGTCAAAACATCCGAGGTTTCAACCTCGTCTTCACTCAAAAACGAGAAACATGTTCTTCATCAACTAGGTTCGTGTCAGCAAATCATTCCTTGTTTCGGAGATGATTACACTTTTGAGAATGGCAAAGAGTATTACAATTTGTTCCTCGAATACGCCTCTGCCGGAACTCTCTCCGATCAAATTCAATTCCATGGTGGCCGGATTCCTGAACAACACATTCGCCGTTACACGAGGTCAATTGTCCAAGGTCTTGATCATATTCATCACAATGGATTCGTTCATTGTGATATAAAGCTTCAAAATATTTTAGTATTCAATGATGGTGAAATCAAAATTGCTGATTTTGGTCTTGCGAAGAAAACAGGGGAAAAACAGAGGTTTGAATGCAGGGGAACTCCACTTTTTATGTCGCCGGAAACATTGAACGACGGGGAGTATGAGTCTCCGGTAGACATTTGGGCACTTGGGTGTGCGGTGGTGGAGATGGCAACGGGAAAACCAGCGTGGAATTTGGAGAAAGATTCGAATATGTGGTCGTTGTTGCTTCGAATTGGTGCCGGAAAAGAATCTCCGGTGATCCCTGAAGATTTATCAAAAGAGGGAAAAGATTTTGTGGAGAAGTGTTTTGTGAAAGATCCAAGAAAAAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTTGTTGAAGAATTGAAGATTGTCAATGAATCATCACCAAGATGTCACTTTGATTTCAATGATTGGGTTTCTGGTGTTAGTGATTCAATTCCGAATTCGCCGGAATCTGAAGAATTTTGTCAATGGGATTTTAATTCGGCGGTGGATCGGCTCCGGCAGCTTGTGACTGTTGAAGGGCTGGTGAGTTGGTCGGAATCAGATAGTTGGATTAGTGTTAGGTGA 990 0.4232 MDWVRGETVGRGSFATVHLANSSQFLSPTAVKTSEVSTSSSLKNEKHVLHQLGSCQQIIPCFGDDYTFENGKEYYNLFLEYASAGTLSDQIQFHGGRIPEQHIRRYTRSIVQGLDHIHHNGFVHCDIKLQNILVFNDGEIKIADFGLAKKTGEKQRFECRGTPLFMSPETLNDGEYESPVDIWALGCAVVEMATGKPAWNLEKDSNMWSLLLRIGAGKESPVIPEDLSKEGKDFVEKCFVKDPRKRWTAEMLLNHPFVEELKIVNESSPRCHFDFNDWVSGVSDSIPNSPESEEFCQWDFNSAVDRLRQLVTVEGLVSWSESDSWISVR* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3610 329 CDD STKc_MAPKKK 2 258 - -
Mal5g3610 329 SMART serkin_6 3 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3610 329 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 299 - -
Mal5g3610 329 SUPERFAMILY Protein kinase-like (PK-like) 3 287 IPR011009 -
Mal5g3610 329 Pfam Protein kinase domain 5 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3610 329 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 299 - -
Mal5g3610 329 Gene3D Transferase(Phosphotransferase) domain 1 2 295 - -
Mal5g3610 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Mal5g3610 329 ProSiteProfiles Protein kinase domain profile. 3 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3610 329 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3610 Mal-Chr5 102586485 102587474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3610 1 329 MAP Kinase Kinase Kinase AT5G67080 50.559 1.69e-117 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal5g3610 Pkinase 4.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3610 - - aprc:113858661 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3610 5 102586485 102587474 Mal5g3610 5 102586485 102587474 ECH
Mal6g1320 6 23539259 23540209 Mal5g3610 5 102586485 102587474 PCT