Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3609 ATGGATTGGGTACGAGGAGAAACTGTTGGCAGAGGAAGCTTTGCAACAGTTCATTTAGCAAATTCATCTCAATTTCTTTCTCCGACAGCCGTCAAAACATCCGAGGTTTCAACCTCGTCTTCACTCAAAAATGAGAAACATGTTCTTCATCAACTAGGTTCTTGTCAACAAATCATTCCTTGTTTTGGAGATGATTTTACCTTCGAGAATGGTAAAGAGTATTACAATTTATTCCTCGAATACGCCTCCGCCGGAACTCTCTCCGATCAAGTTCAATTCCACGGTGGCCGGATTCCTGAACAACACATTCGACGTTACACGAGGTCAATTGTTGAAGGTCTTGATCATATTCATCACAATGGATTCGTTCATTGTGATATAAAGCTTCAAAATATTTTAGTATTCAATGATGGTGAAATCAAAATTGCTGATTTTGGTCTTGCGAAGAAAACAGGGGAAAAACAGAGGTTTGAATGCATGGGAACTCCACTTTTTATGTCGCCGGAAACATTGAACGACGGCGAGCATGAGTCTCCGGCGGATATTTGGGCACTTGGCTGTGCGGTGGTGGAGATGGCAACGGGAAAATCAGCATGGAATTTGGAGAGAGATTCAAATATGTGGTCGTTGTTGCTTCGAATTGGCACCGGAGAAGAATCTCCGGTGATACCTGAAGAGTTGTCCAAAGAAGGAAAAGAATTTGTTGAGAAGTGTTTTGTGAAAGATCCAAGAAAAAGATGGACGGCAGAAATGCTTTTGAATCATCCTTTTGTTGAAGAAGTGAAGAATGTTAATGAATCATCACCAAGATGTCACTTTGATTTCAATGATTGGGTTTCCAGTGTCAGTGATTCGATTCCGAATTCACCGGAATCTGAAGAATTTTGTCAATGGGATTTTGATTCTAGTTTTTGTTCCGCGGCGGATCGTTTCCGGCAGCTTGTGACTGATCAAGGGCCAGTGAATTGGTCGGAATCAGATAGTTGGATTAGTGTTAGGTGA 1002 0.4162 MDWVRGETVGRGSFATVHLANSSQFLSPTAVKTSEVSTSSSLKNEKHVLHQLGSCQQIIPCFGDDFTFENGKEYYNLFLEYASAGTLSDQVQFHGGRIPEQHIRRYTRSIVEGLDHIHHNGFVHCDIKLQNILVFNDGEIKIADFGLAKKTGEKQRFECMGTPLFMSPETLNDGEHESPADIWALGCAVVEMATGKSAWNLERDSNMWSLLLRIGTGEESPVIPEELSKEGKEFVEKCFVKDPRKRWTAEMLLNHPFVEEVKNVNESSPRCHFDFNDWVSSVSDSIPNSPESEEFCQWDFDSSFCSAADRFRQLVTDQGPVNWSESDSWISVR* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3609 333 CDD STKc_MAPKKK 2 258 - -
Mal5g3609 333 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 315 - -
Mal5g3609 333 Pfam Protein kinase domain 5 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3609 333 Gene3D Transferase(Phosphotransferase) domain 1 2 299 - -
Mal5g3609 333 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 315 - -
Mal5g3609 333 SMART serkin_6 3 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3609 333 SUPERFAMILY Protein kinase-like (PK-like) 3 291 IPR011009 -
Mal5g3609 333 ProSiteProfiles Protein kinase domain profile. 3 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3609 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Mal5g3609 333 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3609 Mal-Chr5 102507725 102508726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3609 1 333 MAP Kinase Kinase Kinase AT4G36950 52.436 6.47e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal5g3609 Pkinase 2.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3609 - - aprc:113858661 493.041