Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3606 ATGGATGTCGACATAGAAATGATGATGCAAATGGAAAAGTTCTCTGAATTCTCTGAACCATTTTACAACACCACTTTCCAAGAAATCACCACCAACAACACTGTTCCATTATTTAACCTTAACCAAAATGCACTATCATCTCCACAAACTCTGAATGTTGATCCAAATGTCAATTTCCAACAAGAGTTGAATATCACACCATCACCTTTTCAACAAACCAACTCTTCATCATTTCCCTACTCGAACTCCTCGAATTCTTCTGATAAGAAGAATTCGATGGCAGCGATGAGGGAAATGATATTTAGAATAGCAGTGATGCAACCTATACATATCGATCCGGAATCTGTTAGGCCACCGAAGAGAAGGAACGTGAAGATATCGAAGGATCCACAAAGCGTGGCGGCGAGACATAGAAGGGAAAGGATTAGTGAGAGGATAAGGATATTGCAAAGATTAGTACCTGGTGGAACAAAAATGGACACTGCTTCTATGTTGGATGAAGCTATACATTATGTGAAGTTTTTGAAGAAACAGGTTCAAACGTTGGAACAAGTAGGGGCTAATAATAGATCATCACAAATATCACACATTGGTGGTGGTGGGGGTGTGATGAGCAATTTTAATGCAATGAATTATAATTCTAGTTTGATGATGAAGGGTTGTCAACCTTTTCAAATGGTGGGGTCCAATTCTAAACAATTGCTTAGCTAG 711 0.3882 MDVDIEMMMQMEKFSEFSEPFYNTTFQEITTNNTVPLFNLNQNALSSPQTLNVDPNVNFQQELNITPSPFQQTNSSSFPYSNSSNSSDKKNSMAAMREMIFRIAVMQPIHIDPESVRPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANNRSSQISHIGGGGGVMSNFNAMNYNSSLMMKGCQPFQMVGSNSKQLLS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3606 236 Gene3D - 125 196 IPR036638 GO:0046983
Mal5g3606 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Mal5g3606 236 PANTHER TRANSCRIPTION FACTOR HEC2 5 227 - -
Mal5g3606 236 MobiDBLite consensus disorder prediction 67 92 - -
Mal5g3606 236 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 5 227 IPR045843 GO:0003700|GO:0006355
Mal5g3606 236 SMART finulus 132 181 IPR011598 GO:0046983
Mal5g3606 236 Pfam Helix-loop-helix DNA-binding domain 136 175 IPR011598 GO:0046983
Mal5g3606 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 185 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3606 Mal-Chr5 102430595 102431305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3606 2 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 58.252 3.62e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g3606 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3606 - - gmx:100800816 240.736