Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3599 ATGTCTCAGAGATTGGCTCCAGCACCATTTTTGACCAAGACTTATGAGATGGTGGATGATCCTCTCACTAATGATGTGATTTCTTGGGGTGAAAGTGGCAACACTTTTGTTGTGTTGAAACAAGCTGAATTTGCTAGGGATTTGCTTCCTAAATATTTCAAGCACAACAATTTCTCAAGCTTTGTTCGTCAACTCAACACCTATGGGTTCCGAAAGATTGTTCCTGACAAATGGGAATTCTCCAACGAGAATTTCAAACGAGGAGAGACCGAGCTGCTTCCGACGATCAAGCGTCGGAAGACCCAATCCCCAGCAACTGTAAGATCCATTGGTGTTGGGGTGAATTCAGGTGCGAACTCTGGTGAAGATATGGGTTCCACCTCAACTACATCAGTGGAACCATCAGATTTATCCATTGAAAACAAAAGATTGAAAATGGATAACGAGAAGTTGAGCAATGAGCTGGCACTTGCGAAGAAGCAGTGCGAAGAATTGCTAGCTTATCTTCAGGATGATCTCAAGATTGGGGCTGATCAAATTAACCTGATCATCGGCCAAGGAACAAACGGGTCCAGCCATGATGACAATGAATGTGGAAAGGTTGTGAAACTGTTTGGAATTTGGTTGAAAGAGAACAAAGGGAATGACAAGGTGAAGATTGACAATGCCAAAGATAACTGCCGCAAGAGAGGGCGTGAAGATCCAATTGGTGGTGCCAATGAGTTCAAGAATGTTGTCTAG 741 0.4345 MSQRLAPAPFLTKTYEMVDDPLTNDVISWGESGNTFVVLKQAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFSNENFKRGETELLPTIKRRKTQSPATVRSIGVGVNSGANSGEDMGSTSTTSVEPSDLSIENKRLKMDNEKLSNELALAKKQCEELLAYLQDDLKIGADQINLIIGQGTNGSSHDDNECGKVVKLFGIWLKENKGNDKVKIDNAKDNCRKRGREDPIGGANEFKNVV* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3599 246 Coils Coil 141 168 - -
Mal5g3599 246 Gene3D - 3 101 IPR036388 -
Mal5g3599 246 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g3599 246 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g3599 246 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g3599 246 MobiDBLite consensus disorder prediction 102 137 - -
Mal5g3599 246 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g3599 246 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g3599 246 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal5g3599 246 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-1 2 227 - -
Mal5g3599 246 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 227 IPR027725 -
Mal5g3599 246 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3599 Mal-Chr5 102294607 102297987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3599 2 217 HSF AT4G36990 50.000 1.77e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal5g3599 HSF_DNA-bind 9.3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3599 K09419 - gmx:100801638 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1285 6 22908749 22910564 Mal5g3599 5 102294607 102297987 PCT