Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3598 ATGGCTGTTCCAAATTCTATTTCTAATGATATTGTTGGAACATTATTGTTACCAGATAAGGAACAAGAAGACTCTATCATAGTATCCACCCTCATTCACGTTCTCTCCTCCTCTAATAATGTTGTTGCTCCTGTTTCTCAGACGCTGAATTGTCAGTGTACCCGTATCCAACAAAATTTCGGGGTGCCAACCAACTTACCCCCTAACAACCAACATTACAAGGAAAGGGAATTAGTTAAAGCAGCCACGTCATCAAGTGCAAGTGGGTCCCTCTTGTCATACCAGAACCAATATGATCCTGACACGTGTTGTGTGTGCAAAATCAACGGCTGTCTCGGTTGCAGATTATTCTTTGAGAAAGAGAAAGTGGAGAAGGGGAAGAAATACAGGGGAGTGAGGCAGAGAGCATGGGGGAAATGGGTGGCTGAGATAAGAGACCCAAAAAGAGCAACTCGTGTTTGGCTTGGTACTTTTCAAACAGCTGAGAATGCTGCAAGAGCTTATGATCAAGATGCTATTAAGTTTCATGGAGCTAGAGCTAAAATCAATTTTGATTTCTCTGATTATGATGTAGTTGCTGATGAAAAGAAGCAAAGTGTGACAGTGCAGGATTTTGTTGGTGAAGTTTCAGGAGTGAAAAACCAAACAAAAACTACTATCTTATCATTTGGGTCACCAGAAGTGAACTAG 690 0.413 MAVPNSISNDIVGTLLLPDKEQEDSIIVSTLIHVLSSSNNVVAPVSQTLNCQCTRIQQNFGVPTNLPPNNQHYKERELVKAATSSSASGSLLSYQNQYDPDTCCVCKINGCLGCRLFFEKEKVEKGKKYRGVRQRAWGKWVAEIRDPKRATRVWLGTFQTAENAARAYDQDAIKFHGARAKINFDFSDYDVVADEKKQSVTVQDFVGEVSGVKNQTKTTILSFGSPEVN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3598 229 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Mal5g3598 229 PRINTS Ethylene responsive element binding protein signature 129 140 IPR001471 GO:0003700|GO:0006355
Mal5g3598 229 CDD AP2 129 185 IPR001471 GO:0003700|GO:0006355
Mal5g3598 229 Pfam AP2 domain 128 177 IPR001471 GO:0003700|GO:0006355
Mal5g3598 229 SMART rav1_2 128 191 IPR001471 GO:0003700|GO:0006355
Mal5g3598 229 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 199 - -
Mal5g3598 229 Gene3D AP2/ERF domain 127 186 IPR036955 GO:0003700|GO:0006355
Mal5g3598 229 ProSiteProfiles AP2/ERF domain profile. 128 185 IPR001471 GO:0003700|GO:0006355
Mal5g3598 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 20 199 - -
Mal5g3598 229 SUPERFAMILY DNA-binding domain 128 186 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3598 Mal-Chr5 102285926 102286861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3598 21 189 AP2-EREBP Transcription Factor Family AT4G34410 39.614 1.29e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal5g3598 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3598 - - cam:101497463 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3598 5 102285926 102286861 Mal5g3598 5 102285926 102286861 ECH