LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g3592	ATGAAGGAAATTGGTTTTTTAAAGAGACCAAGAACTGGAGATGAAATATATGAATTTCTACCAACCAAAATAATTAGGCCCATCAGCGAGCTGATTAGGAGGAGAATGTTCTCGCAACGCTCTTCCCCTCCGGCAGTGGTGGAGGAGCAATGCTACTCCACCCTCACTTCAGATGATTCATCCACATCTTGTTGCTCCAGTAACAACCTCAATCTAAATAGGATCACAGATAGTGAGGTTGATAGTGCCAAGAAAGTTGAAACGTCGATGTGCTACAGCGGTGGTGAAATTATAAGGAGAAGAGAGATGGGTCTGACAAGTGAGGTACGAGCAGAAGAAGAAGAAGAGGAAGAGGTGGATTCTCATTCAATGGAGAAGAAGAAGACGCAAAATATGCCAACGGAATCTGAACTTGATGAATTCTTCTCTGAAGCTGAAAAAGATGTTCAGAAACAGTTTCAAAACAAGTATAATTACGATATTGTGAAGGACATGCCATTGGAAGGACGTTATGAGTGGGTTCAATTAAAGCCATAA	537	0.4134	MKEIGFLKRPRTGDEIYEFLPTKIIRPISELIRRRMFSQRSSPPAVVEEQCYSTLTSDDSSTSCCSSNNLNLNRITDSEVDSAKKVETSMCYSGGEIIRRREMGLTSEVRAEEEEEEEVDSHSMEKKKTQNMPTESELDEFFSEAEKDVQKQFQNKYNYDIVKDMPLEGRYEWVQLKP*	179

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g3592	178	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR 7	39	178	-	-
	Mal5g3592	178	Coils	Coil	112	132	-	-
	Mal5g3592	178	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED	39	178	IPR044275	GO:0004861\|GO:0045736\|GO:0051726
	Mal5g3592	178	Gene3D	p27	104	178	IPR044898	-
	Mal5g3592	178	MobiDBLite	consensus disorder prediction	120	134	-	-
	Mal5g3592	178	MobiDBLite	consensus disorder prediction	108	138	-	-
	Mal5g3592	178	Pfam	Cyclin-dependent kinase inhibitor	132	176	IPR003175	GO:0004861\|GO:0005634\|GO:0051726

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g3592	Mal-Chr5	102216494	102218151	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g3592	133	178	Core Cell Cycle Gene Families	AT1G49620	69.565	4.15e-18	76.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g3592	-		-	gmx:547743	125.176

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g1295	7	41899507	41900686	Mal5g3592	5	102216494	102218151	PCT