Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3573 ATGGCAACCCAAATCAGCCGAACGATAAATTTCCCACGTTACAAAGAAATAGATGAATATATTGCAAGACTGAATGTATTAACCCCGACGCCCACTCAAGTCATCACCGGAGCTACTTGTACTCAAGCTGTTCTTGGTGAGAAGGGAAGGAAGACTAAAGAACTTACCTCAATAATACATGAGAGGTTGAAGTTTCCTGACAACAGTGTGGAACTTGACAACATTGGGCTTTGCGCCATCACTCAGGCTGAGTCTCTTCGCTACATGCTTCTCGGGGGTCTTGCAGTGCGCAGGGCCTGCTATGGTGTTTTGAGATTTGTCATGGAAAGTGGTGCCAAGGGTTGCGAGATTATTGTCAGTGGGAAAATGAGAGCCCAGAGAGCCAAATCCATGAAGTTCAAGGATGGTTACATGATTTCTTCTGAACAACCAGTCAAGGATTACGTTGACTCTGCAGTGAGATATGTGTTCCATAGACAGGGTTTTGTCGGTATTAAGGTGAAGATCATACTTTCAAGGTTCCCTCCACAATCCAAAGGAGGAATAATAGATCCGGTTTGCTGCTGCTGTGGCAAATGA 579 0.4491 MATQISRTINFPRYKEIDEYIARLNVLTPTPTQVITGATCTQAVLGEKGRKTKELTSIIHERLKFPDNSVELDNIGLCAITQAESLRYMLLGGLAVRRACYGVLRFVMESGAKGCEIIVSGKMRAQRAKSMKFKDGYMISSEQPVKDYVDSAVRYVFHRQGFVGIKVKIILSRFPPQSKGGIIDPVCCCCGK* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3573 192 Pfam Ribosomal protein S3, C-terminal domain 88 169 IPR001351 GO:0003735|GO:0006412
Mal5g3573 192 PANTHER RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED 26 186 - -
Mal5g3573 192 Gene3D - 14 75 IPR015946 -
Mal5g3573 192 SUPERFAMILY Ribosomal protein S3 C-terminal domain 74 171 IPR036419 -
Mal5g3573 192 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 26 186 - -
Mal5g3573 192 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 28 73 IPR009019 GO:0003723
Mal5g3573 192 Gene3D - 76 186 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3573 Mal-Chr5 101723545 101728539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3573 1 186 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 59.512 3.28e-75 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3573 K02985 - gmx:100800747 226.868