Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3569 ATGGGTCTCTGCACTTCAAAACCACTCTCTTCACCCAATTCCGAAACCACCATTCACATTCAATCACAATCAGAAACCACCACTTCCACCAATGTAGTACAAACTCAAAACCCTAAAAAATCACCATTATTCCCCTTTTACACACCAAGTCCAGCTCACCATTTATTCTCCGGCAAAACTCCGGCAAGAACTCCGAGGAGATTTTTCCGACCACCATCGCCTGCAAAGCACATTAGGTCACTGTTAGCTCGCCGGCACGGCTCTGTTAAGCCGAACGGTGCTAGTAGCATATCTGAAGGGAGTGAAGGTGAAGGTGTTGCTCCTCTTGATAAGAATTTTGGATTTTCGAAGCATTTTGGTAGTAAGTATCAGCTTGGTGAAGAAGTTGGTAGAGGACATTTTGGTTATACTTGTTCTGCTCTTGTTAAGGTTAATTATAAGGGTGATCTTAAGGGTCATCGTGTTGCTGTTAAGGTTATTCAGAAAGTTAAGATGACTACTGCTATTGCTATAGAGGATGTGAGAAGGGAGGTGAAAATTTTAAGAGCTTTGAATGGACACAAAAATTTGATAAAATTCTATGAGGCTTATGAAGACCATGATAATGTTTATATAGTCATGGAGTTGTGCGAAGGAGGAGAGCTTTTGGATAGAATACTATCGAGAGGTGGGAAATACTCCGAGGAAGATGCAAAAGCTGTCATGACACAAATTCTGAATGTTGTTGCATTTTGCCATTTACAAGGTGTTGTTCATCGCGATCTTAAACCTGAGAACTTCTTGTTTTCGACCAAAGATGAGAACTCAGAGCTGAAGGCCATTGACTTTGGTTTGTCGGATTTTGTTAAACCGGATGAACGGCTTAATGATATTGTTGGTAGTGCATACTATGTGGCTCCCGAGGTTTTGCATAGAGCTTACAGTACAGAGGCTGATGTCTGGAGTATTGGTGTGATTGGATATATTTTATTATGTGGCAGTCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTTCGTTCCGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTTTGTCAATTGAGGCGCAGGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAGAGAATGACGGCAGCACAGGCATTAGGTCATCCATGGATTAAAAGTTATAAGATTGTGAAAGTACCGTTGGATATTCTAGTGTTCAAGCTCATGAAGGCATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACATTAGCTACCGATGAGCTGAATTATTTGAAGGAGCAGTTTGCACTTCTAGAACCAAACAAAAATGGCACCATTAACTTGGAAAATATCAAAGCGGTCTTGATGAAGAATGCGACGGATGCTATGAAGGAGTCACGCATTCCTGATCTTGTGGCATCACTTAATGCCTTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTACTGCTGCACTTAGTGTTCATCAACTCGAAGCTCTTGACAGGTGGGAGCAACATGCACGCTGTGCCTATGAAATTTTTGAAAAGGATGGAAACAGAGCTATAATGATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCTTCTGTACCTGTTCATGCTGTTCTTCATGACTGGATTAGGCACACCGATGGAAAGTTAAGCTTCCTTGGGTTTGTTAAGTTGCTGCATGGTCCATCTCGAAGTCTTGTAAAACCCCAGTAA 1740 0.4195 MGLCTSKPLSSPNSETTIHIQSQSETTTSTNVVQTQNPKKSPLFPFYTPSPAHHLFSGKTPARTPRRFFRPPSPAKHIRSLLARRHGSVKPNGASSISEGSEGEGVAPLDKNFGFSKHFGSKYQLGEEVGRGHFGYTCSALVKVNYKGDLKGHRVAVKVIQKVKMTTAIAIEDVRREVKILRALNGHKNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMTQILNVVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIGYILLCGSRPFWARTESGIFRSVLKADPSFDEPPWPSLSIEAQDFVKRLLNKDPRKRMTAAQALGHPWIKSYKIVKVPLDILVFKLMKAYMRSSSLRKAALRALSKTLATDELNYLKEQFALLEPNKNGTINLENIKAVLMKNATDAMKESRIPDLVASLNALQYRRMDFDEFCTAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIMIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPQ* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3569 579 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 28 574 - -
Mal5g3569 579 Gene3D - 413 567 - -
Mal5g3569 579 ProSitePatterns Protein kinases ATP-binding region signature. 129 158 IPR017441 GO:0005524
Mal5g3569 579 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 574 - -
Mal5g3569 579 SUPERFAMILY EF-hand 416 570 IPR011992 -
Mal5g3569 579 Gene3D - 408 497 - -
Mal5g3569 579 CDD STKc_CAMK 122 387 - -
Mal5g3569 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mal5g3569 579 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Mal5g3569 579 MobiDBLite consensus disorder prediction 1 40 - -
Mal5g3569 579 SMART serkin_6 123 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3569 579 Gene3D Phosphorylase Kinase; domain 1 116 215 - -
Mal5g3569 579 Pfam Protein kinase domain 123 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3569 579 ProSiteProfiles Protein kinase domain profile. 123 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3569 579 Gene3D Transferase(Phosphotransferase) domain 1 216 407 - -
Mal5g3569 579 MobiDBLite consensus disorder prediction 86 105 - -
Mal5g3569 579 SUPERFAMILY Protein kinase-like (PK-like) 120 415 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3569 Mal-Chr5 101677785 101681280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3569 1 577 EF-hand Containing Proteins AT3G50530 71.630 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal5g3569 Pkinase 9.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3569 K00924 - gmx:100803313 932.939