Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3566 ATGACAGACATTCGACTTATCTCAACTAGTACAATCCAAGCAACAGATCATGGTGGTGACAACTCAACTCACAAAATTATCCATTTAACTCCATGGGATCTCCAATTACTCAAAATAGACTCAATCCAACAAGGCCTTCTTTACCATAAACCCAAAACCAACCAAATCCAACATCTTAAACAAACACTTTCCTCCACTCTCCATTTATTTCCACCCTTCGTTGGTGGTCTTGAAATAACACAATACGACGAACAAAACAACGTCACATGTTCCATCATTTGTAACAATGCTGGTGTGTTGTTTGTCCACGCCACCGCAGAAAACATTACCATTGATGACATCCTTCAACCCAACTATGTTCCTCCCATTGTTCACTCATTATTTCTGTTAGATAATAAAATATTGGGTGTATGTACATCACAACCATTGCATGCGGTTCAAGTAACAGAGTTAATCAACGGTATCTTTGTAGGTTTTGAAATGAACCACGTGGTTGTAGATGCCAAGTCATTTTGGCTTTTCGTCAATTCTTGGGTTGAAATCTCGCGTGGTTTCAATAAACCAACAAAAATTCCTTCTTTCGAACGTTTCTTTCCAAACGACATTAACCTTCCCATACAATTTCCTTTCCCAAAGGAAGCACAAAGTCAACAATGTGAAGAACAAATTATGCAACTTAAATCAAAAGTTAATGCGGAAATCAGTTGTAATAGTAGTAGTAGTGGTGGTGGTGATAAAATAAAAATAATAATATCTTCATTGCAAGCGCTTTTAAGTCACATTTGGCGTTTAACAATAAGTAAACAAAATCTTAAACCAGAAGAAGTGACTTTTTTCGTGTTACCAATAGATTGTAGGACAAGAATGTGTCCAGAGCTAGAAGAGAATTATTTTGGAAACGGGATTGGAGCGATTGGAGTTATGGGATTGGTAAGGCTGCTATATATGGAAATGAACAAGAAGATTTCTACTAAATCTGATCATGAGAAGATAATGAAGAATTATGAGTCTTGGTTGAAAACACCGGTTCTATCAGAGTCAGAGTCAGGGAGTATGTTGTTAGTAAGCAATTCCCCAAGGTTAGATTTTTATGGTAATGACTTTGGTTGGGGTAAGCGAATTGCAGTTAGGAATGGGGTTGGACTACAAAAAAATATTGGTCAACTTACTGTATTTGGTGGGGCAGAAGAGGGTAGTATCGATGTTGATGTTTGTCTTCCTTATGATATTTTGGAAGCTATGGGAAATGATTATCTATCCATGAATACTATGTTGTCTAATTATGCATATAGGTTCCTAGTAGTAATATTAGTTATTTTTATGTGA 1326 0.3643 MTDIRLISTSTIQATDHGGDNSTHKIIHLTPWDLQLLKIDSIQQGLLYHKPKTNQIQHLKQTLSSTLHLFPPFVGGLEITQYDEQNNVTCSIICNNAGVLFVHATAENITIDDILQPNYVPPIVHSLFLLDNKILGVCTSQPLHAVQVTELINGIFVGFEMNHVVVDAKSFWLFVNSWVEISRGFNKPTKIPSFERFFPNDINLPIQFPFPKEAQSQQCEEQIMQLKSKVNAEISCNSSSSGGGDKIKIIISSLQALLSHIWRLTISKQNLKPEEVTFFVLPIDCRTRMCPELEENYFGNGIGAIGVMGLVRLLYMEMNKKISTKSDHEKIMKNYESWLKTPVLSESESGSMLLVSNSPRLDFYGNDFGWGKRIAVRNGVGLQKNIGQLTVFGGAEEGSIDVDVCLPYDILEAMGNDYLSMNTMLSNYAYRFLVVILVIFM* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3566 441 Gene3D - 2 205 IPR023213 -
Mal5g3566 441 Pfam Transferase family 22 413 - -
Mal5g3566 441 Gene3D - 219 418 IPR023213 -
Mal5g3566 441 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 423 - -
Mal5g3566 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3566 Mal-Chr5 101657125 101660024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3566 57 406 Monolignol Biosynthesis Gene Families AT5G48930 24.147 6.78e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3566 - - mtr:MTR_4g094828 559.296