Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3560 ATGGATCGGGCTGCGATGACGGTTGGACCGGGTATGGATTTACCGATCATGCACGACAGTGACCGGTACGATCTGGTTCGTGATATCGGGTCCGGAAATTTCGGTATTGCTAGGTTGATGCAAGATAAACAAACTAAAGAGCTTGTTGCTGTTAAATATATAGAACGTGGTGATAAGATTGATGAAAATGTGAAGAGAGAAATTATTAATCACAGGTCTCTGAGACACCCTAACATTGTTAGGTTTAAGGAGGTCATTTTAACACCTACTCATCTTGCCATTGTAATGGAGTATGCATCTGGAGGAGAACTTTTCGAGCGAATCAGTAATGCTGGCCATTTTTCTGAGGACGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTACTGCCATGCAATGCAAGTATGTCACCGGGACCTGAAATTGGAAAATACTTTGTTGGATGGAAGCCCAACTCCTCGTCTGAAGATATGTGATTTTGGTTACTCCAAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCGGCATATATTGCTCCAGAAGTATTACTGAGACAAGAGTATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTAACCTTATATGTGATGCTAGTGGGGTCGTATCCTTTTGAAGATCCGAATGAGCCAAAAGATTTCCGGAAGACAATACAGAGAGTACTCAGTGTCCAGTATTCCATTCCAGACAATGTTCAAATATCTCTAGAGTGTCGCCACCTTATCTCCAGGATCTTCGTTTTTGACCCTGCAGAGCGAATTACCATGCCTGAAATCTGGAAACATAAATGGTTTTTGAAGAATCTTCCCATGGACCTGATGGATGAGAAGATAATGGGTAACCAATTTGAAGAGCCTGAACAACCCATGCAGAGCATTGATACAATTATGCAGATAATTTCAGAAGCTACTATACCAGCAGCTGGAACCTGTTCTTTAGACCAGTTTATGGCAGATAACATTGATATGGACGAAGAATTTGATGACTTGGAATATGAATCCGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATGTACTAA 1092 0.4194 MDRAAMTVGPGMDLPIMHDSDRYDLVRDIGSGNFGIARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERISNAGHFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPTPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRVLSVQYSIPDNVQISLECRHLISRIFVFDPAERITMPEIWKHKWFLKNLPMDLMDEKIMGNQFEEPEQPMQSIDTIMQIISEATIPAAGTCSLDQFMADNIDMDEEFDDLEYESELDIDSSGEIVYAMY* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3560 363 SUPERFAMILY Protein kinase-like (PK-like) 15 314 IPR011009 -
Mal5g3560 363 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Mal5g3560 363 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3560 363 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 357 - -
Mal5g3560 363 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3560 363 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Mal5g3560 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mal5g3560 363 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Mal5g3560 363 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3560 363 PANTHER SERINE/THREONINE KINASE 14 357 - -
Mal5g3560 363 CDD STKc_SnRK2 22 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3560 Mal-Chr5 101597954 101601551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3560 16 308 CBL-interacting serine-threonine protein kinases AT4G24400 40.391 1.71e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mal5g3560 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3560 K14498 - gmx:100806949 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3560 5 101597954 101601551 Mal7g1321 7 42309729 42313673 PCT