Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3553 ATGGGTCGTAGAAAGTTTGATGGTTCTTGGGAATGCATAAATGGAGGGTTGCATTTGCAGTGCTGTGGGAACCTGTCTCCTGAGCCACACTATCCGTCGATGACGAGTTACCCAAAAGGAACGTCGTCATCGATGGAAGAAAGATCAGAGGTGGCCATAACTGTTGTTTTTTGCGTTATGGGAATGACATGTGCTGCCTGTGCTGGATCTGTTGAGAAAGCAATCAAACGCTTACCTGGCATTCAAGAGGCTGTTGTTGATGTCTTGAATGATAAAGCTCAGGTTCTATATTATCCCACCATCGTTAACGAAGAGAGCATACGTGTGGCCATTGAAGATGCTGGATTTGAGGCCAAATCCATGGAAGATGATAGTTCCAACAACACATCAATTCAAATATGTCGAGTACACATTGGTGGCATGACTTGTACTTCTTGCTCCTCCAACGTGCAATCAGTTCTTCAATCCCTTCGTGGGGTGCAAATAGCACAAGTAGCCTTAGCAACTGAAGAAGCAGAAATTCGTTACGATCCAAAGATTATAAGCTACACTCAACTAATGGAAGCTATATCAAACTCAGGTTTTAACCCCATATTAATAAGCAAAGGGGAACACATAAGCAAAATTGAACTTAAAATTGATGGCATAAAAAATGAGCATTCAATGTATATCATTGAACAATCTCTTAGGTCACTCCAAGGTGTTGAAACTATAGACACATATTTAGACATTAATAAAATTGTGTTAACTTATAAACCTTATATGACTGGACCAAGAACCTTCATTGAACTCATTGAATCTACAGGATCAGGGTGTTTTAAAGCCACAATAGATACTTCAAATGATGGTGGAAGAAAAGCACATAAACAAGAGGAAATTAATAGATACTTTAAATTATTGATTTGGAGTTTGGTTTTTACTATTCCTGTTTTTTTAACATCTATGGTTCTTATGTATATACCTGGAGTTAAAGATGTTTTAGATATCAAAATTGTGAATATGTTGAATATTGGATTGCTCATAAGGTGGGAGTTTTCGACACCGGTACAGTTTGTTATTGGAAGAAGATTTTATGTTGGAGCCTATAAAGCTTTGAGGAAAGGTTATGCAAACATGGATGTGTTGATAGCATTAGGAACAAATGCAGCTTATTTCTATTCTGTCTATGTTGTTGGAAGAGCTACATTTTCTTCCCATTTTGAGGGAAGTGATTTTTTCGAAACAAGTTCTATGCTTATTTCTTTTATTCTACTTGGCAAGTATTTGGAAGTGTTGGCTAAAGGGAAAACATCACAGGCTATTGCAAAACTCATGGATTTAACACCTGATACAGCAATGTTATTAACTCTAGATGATGATAAGGGAAATGTTATAGGTGAAAGAGAAATTGATAGCAGGTTGATACAGAAGAATGATGTGATCAAAGTTGTGCCGGGCGCGAAAGTAGCATCCGATGGTTTTGTTGTTTGGGGACAAAGTCATGTAAATGAGAGTATGATAACTGGTGAGGCAAAGCCTGTTGCTAAGATGAAGGGTGATATGGTTATTGGTGGTACTGTGAATGAGAATGGTGTTTTGCATGTTAAGGTAACAAGGGTTGGATCAGAAACTGCACTTTCACAGATTGTTAGACTTGTTGAGTCTGCTCAAATGGCTAAAGCTCCTGTCCAGAAATATGCTGACCAGATTTCTAAATACTTTGTTCCTATAGTGATTGTGTTATCTCTTTCAACATGGATATCATGGTTTGTAGCTGGAAAGTTGCATACATACCCAAAATCATGGATACCATCTTCCATGAATAGTTTTGAGCTTGCACTTCAGTTTGGAATTTCAGTCATGGTCATAGCTTGTCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTTATGGTTGGTACCGGAGTAGGTGCAACTCAAGGTGTGTTGATCAAAGGTGGCCAAGCATTAGAAAGTGCACACAAGGTGAATTGCATTGTGTTTGATAAGACAGGAACTCTCACTATTGGGAAGCCAGTGGTTGTAACTACAAAACTCTTCAATAACATGTCAGTTAAAGATTTCTATGAACTTGTTGCTGCAGCAGAGGTGAATAGTGAACATCCAATAGCAAAGTCCATTGTTGATCATGCCAAAAATATCACACAAGATGAACAGAACCATTCATCATGGCCAGAAGCAAAAGACTTTGTGTCTGTTGCAGGACATGGAGTGAAGGCAATTGTTCAAAACAAGGAAATAATGGTTGGAAACAAAAAACTGATGTTAGATCATAACATAGCTATTTCAGTGGAAGCTGAAGAAATACTAGCTGAAGCTGAAAGCATGGCTCAAACAGGAATTTTAGTATCATTGGATGGAGAAATTGTTGGGGTTTTGGCTGTGTCTGATCCATTAAAACCTGATGCAAAAGAAGTTATTTCTGTTCTTAAATCCATGAAAATAAGGAGCATAATGGTGACAGGTGATAATTGGGGAACTGCAAATTCTATAGCTAGACAAGCTGGTATTGAAACTGTTATGGCTGAGGCTCAACCTGAGACTAAAGCTACTAAAGTAAAAGAATTGCAGAGTTCTGGATACACAGTAGGAATGGTGGGAGATGGTATCAATGATTCACCAGCACTAGTAGCAGCTGATGTTGGAATGGCAATTGGTGCTGGCACAGACATAGCTATTGAAGCAGCTGATATTGTTCTCATGAAGAGTAACTTAGAGGATATAATAATTGCCATTGACCTTGCAAAGAAAACATTCTCACGTATACGTCTAAATTACATTTGGGCTTTAGGCTATAATATTCTAGCCATTCCTATTGCTGCTGGCATACTTTATCCATCTACTAGATTTAGGTTACCACCTTGGATTGCTGGAGCTGCAATGGCTGCATCTTCTATCAGTGTTGTGTGCTCTTCACTCTTGTTAAAGAAATACAAGAAACCAACCAAGCTTAACAACTTGGAGATGAATGGTATTCAAATTGAATGA 2988 0.3845 MGRRKFDGSWECINGGLHLQCCGNLSPEPHYPSMTSYPKGTSSSMEERSEVAITVVFCVMGMTCAACAGSVEKAIKRLPGIQEAVVDVLNDKAQVLYYPTIVNEESIRVAIEDAGFEAKSMEDDSSNNTSIQICRVHIGGMTCTSCSSNVQSVLQSLRGVQIAQVALATEEAEIRYDPKIISYTQLMEAISNSGFNPILISKGEHISKIELKIDGIKNEHSMYIIEQSLRSLQGVETIDTYLDINKIVLTYKPYMTGPRTFIELIESTGSGCFKATIDTSNDGGRKAHKQEEINRYFKLLIWSLVFTIPVFLTSMVLMYIPGVKDVLDIKIVNMLNIGLLIRWEFSTPVQFVIGRRFYVGAYKALRKGYANMDVLIALGTNAAYFYSVYVVGRATFSSHFEGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPDTAMLLTLDDDKGNVIGEREIDSRLIQKNDVIKVVPGAKVASDGFVVWGQSHVNESMITGEAKPVAKMKGDMVIGGTVNENGVLHVKVTRVGSETALSQIVRLVESAQMAKAPVQKYADQISKYFVPIVIVLSLSTWISWFVAGKLHTYPKSWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVTTKLFNNMSVKDFYELVAAAEVNSEHPIAKSIVDHAKNITQDEQNHSSWPEAKDFVSVAGHGVKAIVQNKEIMVGNKKLMLDHNIAISVEAEEILAEAESMAQTGILVSLDGEIVGVLAVSDPLKPDAKEVISVLKSMKIRSIMVTGDNWGTANSIARQAGIETVMAEAQPETKATKVKELQSSGYTVGMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNILAIPIAAGILYPSTRFRLPPWIAGAAMAASSISVVCSSLLLKKYKKPTKLNNLEMNGIQIE* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3553 995 Pfam haloacid dehalogenase-like hydrolase 656 880 - -
Mal5g3553 995 SUPERFAMILY Calcium ATPase, transduction domain A 461 546 IPR008250 -
Mal5g3553 995 ProSitePatterns Heavy-metal-associated domain. 138 167 IPR017969 GO:0046872
Mal5g3553 995 PRINTS Copper-transporting ATPase 1 signature 80 103 - -
Mal5g3553 995 PRINTS Copper-transporting ATPase 1 signature 54 79 - -
Mal5g3553 995 PRINTS Copper-transporting ATPase 1 signature 156 177 - -
Mal5g3553 995 Gene3D - 201 279 - -
Mal5g3553 995 SFLD C1.7: P-type atpase like 642 917 - -
Mal5g3553 995 Gene3D - 427 550 - -
Mal5g3553 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 408 653 IPR023298 -
Mal5g3553 995 PANTHER ATP7, ISOFORM B 26 986 - -
Mal5g3553 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 662 668 IPR018303 -
Mal5g3553 995 SUPERFAMILY HMA, heavy metal-associated domain 53 124 IPR036163 GO:0046872
Mal5g3553 995 Pfam Heavy-metal-associated domain 136 195 IPR006121 GO:0046872
Mal5g3553 995 Pfam Heavy-metal-associated domain 58 117 IPR006121 GO:0046872
Mal5g3553 995 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Mal5g3553 995 PRINTS P-type cation-transporting ATPase superfamily signature 660 674 - -
Mal5g3553 995 PRINTS P-type cation-transporting ATPase superfamily signature 496 510 - -
Mal5g3553 995 PRINTS P-type cation-transporting ATPase superfamily signature 791 802 - -
Mal5g3553 995 PRINTS P-type cation-transporting ATPase superfamily signature 813 823 - -
Mal5g3553 995 PRINTS P-type cation-transporting ATPase superfamily signature 889 901 - -
Mal5g3553 995 Gene3D - 627 923 IPR023214 -
Mal5g3553 995 Gene3D - 54 124 - -
Mal5g3553 995 ProSiteProfiles Heavy-metal-associated domain profile. 208 269 IPR006121 GO:0046872
Mal5g3553 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 412 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g3553 995 Gene3D - 129 198 - -
Mal5g3553 995 SFLD p-type atpase 642 917 IPR044492 -
Mal5g3553 995 ProSiteProfiles Heavy-metal-associated domain profile. 54 120 IPR006121 GO:0046872
Mal5g3553 995 Pfam E1-E2 ATPase 459 638 - -
Mal5g3553 995 SUPERFAMILY HMA, heavy metal-associated domain 204 273 IPR036163 GO:0046872
Mal5g3553 995 ProSitePatterns Heavy-metal-associated domain. 59 88 IPR017969 GO:0046872
Mal5g3553 995 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 26 986 - -
Mal5g3553 995 CDD P-type_ATPase_Cu-like 300 977 - -
Mal5g3553 995 Gene3D - 747 797 IPR023299 GO:0000166
Mal5g3553 995 Gene3D - 667 746 IPR023299 GO:0000166
Mal5g3553 995 TIGRFAM TIGR00003: copper ion binding protein 57 118 IPR006122 GO:0005507
Mal5g3553 995 CDD HMA 59 119 IPR006121 GO:0046872
Mal5g3553 995 PRINTS Copper-transporting ATPase signature 939 953 - -
Mal5g3553 995 PRINTS Copper-transporting ATPase signature 843 860 - -
Mal5g3553 995 PRINTS Copper-transporting ATPase signature 429 447 - -
Mal5g3553 995 PRINTS Copper-transporting ATPase signature 569 583 - -
Mal5g3553 995 PRINTS Copper-transporting ATPase signature 409 428 - -
Mal5g3553 995 PRINTS Copper-transporting ATPase signature 357 376 - -
Mal5g3553 995 CDD HMA 138 195 IPR006121 GO:0046872
Mal5g3553 995 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 372 975 IPR027256 GO:0006812|GO:0016021|GO:0019829
Mal5g3553 995 SUPERFAMILY HAD-like 659 972 IPR036412 -
Mal5g3553 995 ProSiteProfiles Heavy-metal-associated domain profile. 133 199 IPR006121 GO:0046872
Mal5g3553 995 SUPERFAMILY HMA, heavy metal-associated domain 130 203 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3553 Mal-Chr5 101509064 101515728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3553 56 995 Primary Pumps ATPases AT1G63440 71.898 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3553 K17686 - gmx:100817431 1518.06