Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3552 ATGGCTGTGGTTCTAGATGCTGTTATTGGAAAAGTAGTTGATGAACTAATGAGTTCAGTTGTTGAAATGAAGAATAGAGCTTTGAACTTCAAATCAACTCTAGAAAGTTTAGAAAAAACTCTTCAATCATTAGGACCATTAATCAATCAAATAGATGAACTCAACAAGAAATTGGATCGACCAGCTAAAGAAACTGAGAGAATAATCAAACAAATGAAAGATGGAAAAGAACTTGTTCTGAAGTGTTGTGATGAAGACAAAATCCAGTGGTGGAATTGTTGTTACAAAAAGGCAGGGTATCAAGAAGAACTTGAAGCATTGGATGATGAGATTAGAAGATTCTTTGAGCTTGATTTGAGAGCTCAAGATGCGAGGAATGGTTTGGAAACACTTGTGGAGATTAAGGAATTTAGAGCTGAATTTAGAGGTGTTGTTATGGGGAATGAAAGAGTTGAATTAAGAGGTGTTTGTTTGCCACCTCAACCACCTAGTTTTATTGTTGGGTTGGATGGTCCTTTGAATGAATTGAAGATGAGATTGTTGAAGGATGAGGTTAGTGTTTCTGTTGTTACTGTTACTGGTTCTGGTGGTTCAGGGAAGTCTACTTTGGCTAAAAGGTTTTGTTGGGATGATGAAGTAAAAGGTAAATTCAAGGAAAATATCTTCTTCATTACCTTTGCAAAAACACCAAAGCTGAATACTATAGTGCAGAAACTGTATCAACATACTGGTTACCAAGTTCCAGATTTTCAAAGTGATGAAGACACGTTTAACCAATTGGAACATTTGATGAAACAAATTGTGAAAAAAGGACCAATATTGTTGGTTCTAGATGATGTTTGGCTAGGATCAGAATTACTTGTTGAGAATTTTGTGTTTGAGATTCCAAACTACAAGATTCTGGTGACATCAAGATTTGCAATTGGAAGATTTGGTCATCCATTTGTCTTGAAACCTCTTTCTGAAGCACATGCTATAACTCTGTTCAAACATTCAGCATCCTTAACTAAGAGCAGCTCAGATGTTCCTGATGATGTTGTGAAAGAGATAGTAAGAGGGTGTAGTGGTTCTCCCTTGGCACTTCGAGTGAGTGGCAGATCATTAATCAACGAACAACTGATAGTTTGGCTTAACAGAGCAAGGGAATTATCAGCTGGTAGATCAATTCTTGATTCTAACCAGGACGTGCTTTCTTGTCTCCAAAAGAGCTTAGATGTATTGGATCCTAAGTCCATGGAGTGTTTTAGGGACTTAGGCTTATTTCCTGAAGATCAGAGGATCCCTGCTGCTGCCCTTATTGATATATGGGCAGAACTAAGGAATGATGATGATGCAAGTGCAATGGAGAGGATTTTTAAACTAGTTAATCTAAACTTGGCTGATATTATTGTCACAAGGAAAGTTGCAAGTGGCACAATTGACTACAACTACAACTATCACTATGTTACACAACATGGTCTTCTTAGGGACCTAGCCATCCGTAATAACAGCCAAGAGGATAGAATCATAATTGACACAAGTGGCAATAATCTTCCTTCTTGGTGGAATGCAGAGAATGTGCATCAAATTGCAGCTCGCATATTATCCATATCAACTGATGAAACATTCACTTCAAAATGGTGTAACTTGGAGCCAACTGAAGTTGAGGCATTGGTGTTAAATCTTCGAGAAAAGAAGTGTACACTTCCAATGTTCATGAAGAAAATGAACAAACTAAAAGTTCTTATAATCACAAATTACGACTTCTTTCTGGCTGAATTAGAGAATTTCGAGTTGCTCGATCATCTATTGAATCTCAAACGAATGCGATTAGAGAAAGTTTTGATTCCTTTCCTCGGAAAAAAGGTATTACAATTGAAGAATCTTCAGAAGTGTTCTTTTTTTATGTGCAAAGTGAATAAAGCATTTGAAAATTGCACAATGGAAGATTCAGAAATACTACCAAATTTGATGGAAATGAATTTTGACTATTGTGATATGGTGGAATTACCAAATGTGATATCCAACATTGTATCCCTAAAGAAGCTTAGTATTACAAATTGTCATAAGCTTTGTGCACTTCATGAAGGAATTGGAAAATTGATCAATTTGGAATCACTAAGGCTAAGTTCATGCAGTGGTTTATTAGAGTTACCAAACTCAATCACAAATCTTCATAGGCTAAAGTTTCTAAACATTTCTGGATGCATAAGCCTTAGTCAATTACCTGAGAACATGGGTGAGTTGGAGAAATTAGAAAAGCTCAATATGAGAGGTTGTTCGAATATAAGTGAATTGCCAACCTCAGTTATGGAGCTTGAAGGATTAAAGCATGTGGTATGTGATGAAGAGACTGCTGAAAAATGGGAACCTTGCAAAACCATCCTTGGTGATTTAAAGGTAGAGGTTGTTCAAGAAGATTTCAATTTAAATTTTCTTTACAATTAA 2427 0.3618 MAVVLDAVIGKVVDELMSSVVEMKNRALNFKSTLESLEKTLQSLGPLINQIDELNKKLDRPAKETERIIKQMKDGKELVLKCCDEDKIQWWNCCYKKAGYQEELEALDDEIRRFFELDLRAQDARNGLETLVEIKEFRAEFRGVVMGNERVELRGVCLPPQPPSFIVGLDGPLNELKMRLLKDEVSVSVVTVTGSGGSGKSTLAKRFCWDDEVKGKFKENIFFITFAKTPKLNTIVQKLYQHTGYQVPDFQSDEDTFNQLEHLMKQIVKKGPILLVLDDVWLGSELLVENFVFEIPNYKILVTSRFAIGRFGHPFVLKPLSEAHAITLFKHSASLTKSSSDVPDDVVKEIVRGCSGSPLALRVSGRSLINEQLIVWLNRARELSAGRSILDSNQDVLSCLQKSLDVLDPKSMECFRDLGLFPEDQRIPAAALIDIWAELRNDDDASAMERIFKLVNLNLADIIVTRKVASGTIDYNYNYHYVTQHGLLRDLAIRNNSQEDRIIIDTSGNNLPSWWNAENVHQIAARILSISTDETFTSKWCNLEPTEVEALVLNLREKKCTLPMFMKKMNKLKVLIITNYDFFLAELENFELLDHLLNLKRMRLEKVLIPFLGKKVLQLKNLQKCSFFMCKVNKAFENCTMEDSEILPNLMEMNFDYCDMVELPNVISNIVSLKKLSITNCHKLCALHEGIGKLINLESLRLSSCSGLLELPNSITNLHRLKFLNISGCISLSQLPENMGELEKLEKLNMRGCSNISELPTSVMELEGLKHVVCDEETAEKWEPCKTILGDLKVEVVQEDFNLNFLYN* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3552 808 Gene3D Ribonuclease Inhibitor 493 790 IPR032675 -
Mal5g3552 808 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 139 IPR008808 -
Mal5g3552 808 ProSiteProfiles RPW8 domain profile. 1 153 IPR008808 -
Mal5g3552 808 SUPERFAMILY RNI-like 510 772 - -
Mal5g3552 808 Coils Coil 20 40 - -
Mal5g3552 808 Gene3D - 319 403 IPR042197 -
Mal5g3552 808 Gene3D - 150 309 IPR027417 -
Mal5g3552 808 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 808 IPR039203 GO:0050832
Mal5g3552 808 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 808 - -
Mal5g3552 808 PRINTS Disease resistance protein signature 267 281 - -
Mal5g3552 808 PRINTS Disease resistance protein signature 740 756 - -
Mal5g3552 808 PRINTS Disease resistance protein signature 354 368 - -
Mal5g3552 808 PRINTS Disease resistance protein signature 189 204 - -
Mal5g3552 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 418 IPR027417 -
Mal5g3552 808 Pfam NB-ARC domain 172 375 IPR002182 GO:0043531
Mal5g3552 808 Gene3D - 404 492 IPR036388 -
Mal5g3552 808 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3552 Mal-Chr5 101476436 101491607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3552 618 766 WRKY Transcription Factor Family AT5G45050 29.605 6.80e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3552 - - mtr:MTR_8g479450 1239.56