Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3525 ATGTTCCATCATCATCACAAGTCAAAGCTTGCTATTCTCATCATCATCATCATCATCATCACAATTTTCATAACAGTAACAACTGCTGATCAAAAGAACAATAACTGTATTCGAAGATGCGGAAAACAATCTGTGAAGTATCCATTCGGATTCTCCGAAGATTGCGAAATCAAACTAAACTGCAGCAGCAACAAAGAACTCAAAATTGGTGAGCTAAAAGTTCAAGAAGTGAATTCTGATAGTATATTCATAGCTTTACCAGCAAAATGTAACCGTAGCATGAGTTTCATAGACCCACTTTTCGACAAAAGCTATGCTCCAACATGGAACAATACCTTCCTCGTACAGAATTGTCATACAAGCAACCTTAGTGGTTGTGTTATTCCAACGTCGAGTTTCGTTGGAAAACAGATAGAAGGTTGTGATGATTCAAGAAGAAGAAGTGATAAAATCACTTGCTTCACGCAGTTGCAGCGTCGAATACAGCGCGAAGATGTTCTTACGATTGAAGATTGGAATGGAAGTGATTGCAAATATTTGTTCTCTGCTATTGCTGTTGATAGAGTCAAAGAAGTTCCACTTCAGTTTCAGGTGGTTGAGTTAGGGTGGTGGCTTGAAGGTTCTTCTTGTCTATGTTCTGATGAGGCTAATTGTACGGTGGTTGGTCTTGCCGGAGATAAACAAGGTTACCGGTGTCGTTGCCGTGATGGTTTTGCCGGAGATGGATTTGTCAACGGTTCTGGTTGCCGGAGAGTTTCACATTGCAGTCCTAAAACACTTGGGTCTAGCAAATGTGGAAAAGCACTCAGAATTGGTGTACTTCTTGGAGTGATCGCCGTTGGAGCCTCCGTAACGGCTGTACTATCTCTACTATGCTACTTCTCCAAGCGTCGTTCGTCATGGCTGACAAAACAATTGACGGTAAAGCGCCTATTAAGAGAAGCTGCAGGAAACTACATAGTTCCACTCTATCCCTACAAAGAAATAGAGAAAGCCACAAATTTTTTCTCTGAGAAACATAGGCTAGGAACCGGTGCTTATGGCACGGTTTACGCCGGAAACCTTCACAATGATGAATTGGTTGCTATAAAAAAAATCAAGTATAGAGACACCAACAGTGTTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCGGTTAGTCACCCGAATTTAGTACGCCTTTTAGGTTGCTGCATAGAAAAAGGAGAGCATATACTTGTTTATGAGTATATGCCAAATGGAACACTATCTCAACATTTACAAAGAGAAAGAGGTGGAGTACTTCCTTGGACAATAAGACTCACCATTTCCTCTGAAACAGCTAATGCTATAGCATTTCTCCACTCTTCAAATCCTCCAATTTATCACAGAGACATAAAATCTAGTAACATACTATTGGACTTTAGCTTTCAATCAAAAGTAGCGGATTTCGGACTTTCTAGGCTAGGCATGACAGAAACATCACATATCTCAACCGCGCCACAAGGGACTCCGGGTTATGTTGATCCACAATACCACCAAAACTTTCATCTTTCTGATAAAAGTGATGTCTATAGCTTTGGAGTTGTTTTGGTAGAAATAATAACAGCGATGAAAGTGGTTGATTTTGGTAGACCAAAGAGTGAGATTAATTTAGCAGCACTTGCTGTTGAAAAGATTAGAAAAGGCCGTATTGACGACATCATAGATCCTTTCCTTGATCTAAATAGAGATGCTTGGACACTCTATTCTGTTCACAAGGTAGCTGAGCTTGCATTTAGATGCCTCGCTTTTCATAGCGACGCGAGGCCTAGTATGATTGAGGTGGCTGAGGAGCTAGATCATATCAGACGTAGCGGATGGGCTACGATGGAGGAAACTATATGCATGGGCTCATCGGTTGGATCCGCGTGCTCATCGCCTCGTAGTAATAGAAATGAGAATTTAGTCACACAGAAAGAGATATTGGTTGTTCCACAAAAGACTAATAGTTTTTTGCAATCAATAGAGGAGGTGAAGGATAGTTCACCTGTATCTGTTCATGGTACTTGGTCAAGTAGACCTAGCTCACCTTCAACAAACAGCTTGTTGGGAAATGTTGTTCAGTGA 2091 0.4099 MFHHHHKSKLAILIIIIIIITIFITVTTADQKNNNCIRRCGKQSVKYPFGFSEDCEIKLNCSSNKELKIGELKVQEVNSDSIFIALPAKCNRSMSFIDPLFDKSYAPTWNNTFLVQNCHTSNLSGCVIPTSSFVGKQIEGCDDSRRRSDKITCFTQLQRRIQREDVLTIEDWNGSDCKYLFSAIAVDRVKEVPLQFQVVELGWWLEGSSCLCSDEANCTVVGLAGDKQGYRCRCRDGFAGDGFVNGSGCRRVSHCSPKTLGSSKCGKALRIGVLLGVIAVGASVTAVLSLLCYFSKRRSSWLTKQLTVKRLLREAAGNYIVPLYPYKEIEKATNFFSEKHRLGTGAYGTVYAGNLHNDELVAIKKIKYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMPNGTLSQHLQRERGGVLPWTIRLTISSETANAIAFLHSSNPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPKSEINLAALAVEKIRKGRIDDIIDPFLDLNRDAWTLYSVHKVAELAFRCLAFHSDARPSMIEVAEELDHIRRSGWATMEETICMGSSVGSACSSPRSNRNENLVTQKEILVVPQKTNSFLQSIEEVKDSSPVSVHGTWSSRPSSPSTNSLLGNVVQ* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3525 696 SMART serkin_6 336 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3525 696 Gene3D Transferase(Phosphotransferase) domain 1 412 624 - -
Mal5g3525 696 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 673 IPR045274 GO:0007166
Mal5g3525 696 Gene3D Phosphorylase Kinase; domain 1 298 411 - -
Mal5g3525 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Mal5g3525 696 MobiDBLite consensus disorder prediction 671 696 - -
Mal5g3525 696 Gene3D Laminin 211 244 - -
Mal5g3525 696 ProSiteProfiles Protein kinase domain profile. 336 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3525 696 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 20 673 - -
Mal5g3525 696 Pfam Protein kinase domain 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3525 696 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Mal5g3525 696 SUPERFAMILY Protein kinase-like (PK-like) 318 607 IPR011009 -
Mal5g3525 696 CDD STKc_IRAK 342 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3525 Mal-Chr5 100966192 100970345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3525 6 694 Receptor kinase-like Gene Family AT2G23450 53.835 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal5g3525 Pkinase 8.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3525 - - lja:Lj4g3v0867570.1 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1348 7 42612800 42616844 Mal5g3525 5 100966192 100970345 PCT