Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3524 ATGGAGCCAATTATCATGGAGATCGGTGCTGGAAATGATATTATCCAAACCCTAATCAACTTGGCTCGGAGTCGCCAAGTTGGAATCGTTGTTTTGAGTGGTTATGGTCCTGTCACTGATGTTACCATTCATGAACCAGCTTCTCGTTTCCCTCCTATCCACATCGAAGGAGTGTCCAATATGACATTACTTTCTGGAGCATACATCAATGCCAATGATGGCATTGATGGCATTGTTCCTCCCCAGACCACGAACAATGGCATATCACTTTCCTTTTTCTCAATTTGCCTCTCTGATGATCGTGGACGGGTGTTCGGAGGAACGGTTGAAGGGAAGGTTATGGCGGCTGGTCCTGTTATGATTACAGCTGCTTTTGTTATTAAACCTACATTTCATAGGTTGGGTAATGTCAATGGAGCTGTTGAAGTAATGGAGAAGGATAAAGAAGCAAATGATGTTGGTGGTGTTAACATCAATGATGATGCTCAAGCAGCATAA 498 0.4337 MEPIIMEIGAGNDIIQTLINLARSRQVGIVVLSGYGPVTDVTIHEPASRFPPIHIEGVSNMTLLSGAYINANDGIDGIVPPQTTNNGISLSFFSICLSDDRGRVFGGTVEGKVMAAGPVMITAAFVIKPTFHRLGNVNGAVEVMEKDKEANDVGGVNINDDAQAA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3524 165 Gene3D - 2 150 - -
Mal5g3524 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 157 - -
Mal5g3524 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 157 IPR014476 GO:0003680
Mal5g3524 165 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 124 IPR005175 -
Mal5g3524 165 ProSiteProfiles PPC domain profile profile. 1 147 IPR005175 -
Mal5g3524 165 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 134 - -
Mal5g3524 165 CDD DUF296 3 127 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3524 Mal-Chr5 100938362 100938859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3524 1 134 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 30.882 1.98e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3524 - - mtr:MTR_8g078930 173.711