Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3508 ATGGAGGAATTGTGGTTGCATATTAAATCAGTGCACCCTTCTGAATTTAAGCTTTCAATAGCTCCTGAGAATCTAACTTTGTCTTACGGTGATGATTCTACAAAAATGCTTGAGCAGGGAAATGAAGCTTCACAGGACAATAATAATTCCGAGAATCCAAGCAGTTCGCGGAAGTTAAGTTGCAGGTTTTGTGGATTAAAATTTGATTTACTGCCTGATCGCGGTCGCCATCACAAAGCTGCTCATATGGAGCGCAATCGTTCTCGCAGGCGTTTGGATAAGAGGGGAGTTCATTATTATACCCAGAGACTAAAATCAGGCAGACTTGGCCGTCCAAAATTCAAAAGAGGTTTGTCAAAAAACATCAAATAG 372 0.4086 MEELWLHIKSVHPSEFKLSIAPENLTLSYGDDSTKMLEQGNEASQDNNNSENPSSSRKLSCRFCGLKFDLLPDRGRHHKAAHMERNRSRRRLDKRGVHYYTQRLKSGRLGRPKFKRGLSKNIK* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3508 123 MobiDBLite consensus disorder prediction 29 58 - -
Mal5g3508 123 PANTHER SET DOMAIN PROTEIN 1 109 - -
Mal5g3508 123 Pfam Zinc finger C2H2-type, 3 repeats 2 83 IPR040689 -
Mal5g3508 123 ProSitePatterns Zinc finger C2H2 type domain signature. 61 82 IPR013087 -
Mal5g3508 123 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3508 Mal-Chr5 100670183 100670554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3508 2 118 C2H2 Transcription Factor Family AT2G23740 47.899 5.60e-26 99.4