Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3506 ATGGGAATAGCAACAACACCATCATCACTTCCTTCAACTTTCTCAAATTCAACAAACACACACCAATATCATAATTCAATCTTAGAAAAGTCTCAAAACTCAACCAATTCTATGTCCCAAGATTATCACCACCACCACCACCAACAAGGAATCTTCAACTTCTCGAACGGATTCGAGAGATCGAACACTCCGGTAGAAAACAACAATCCACATCAAATTCAAAGAGACAAAGTGCAAGTACAAGACTTCGACTCACAACAACAACAACAACCACCACCACCGCAACTAATAGGGGGTATAGAAGAAGAACAAGAACCTCTCCCGGTCTACGAAACAACCGGAATGTTGTCTGAGATGTTCAATTTCCCTCACGGCGCCTCGGCAGCCGAATTATTAGAACAACAACAGCAACAACAACAACAACAACAAATGGCATCAACAAGAACACCATCACCACATGGAATAGCCAATTCAAGTGACTGGTACGGAACCAGACAAACGATTTTAACAGATTCAAAGAATCATCATAATAACCGTGACAGTAGCAGCAGCAGCAGCATATTTCATCATCAAAATCATCATCAGATGTCAAACATAAATGCTGAGTCAGCAGCTGCCATGCAGCTTTTTCTCATGAATCCACAAACCACCAGATCTCCTTCACCTCCACCACCATCTACAAACTCCTCTACTCTCCACATGTTACTTCCCAATCATTCAACTACAAATCTTCAAGGCTTTGGTTCCGGCGCCGGAGGTTCTTTTGGTCAATTCACATGGTCTCAAGAAGGAGGAGGAACAACAAGTCATCACCAACTCAACAACAACCAACCTGAAATGGCAAGTGTTGTTGAAGGACAAGGTCTTTCGTTGTCGTTATCGTCTTCCTTACAACATCATCATTCTGAAGATTTAAGAATGGGTGATGCTGCTGCTGGTGGTTTTCTATATTACAATCAAGGAGGACCAGGAACTTCTTACAAGAATCTTAGTGGTGTTCATCATCATTTACAAGGAGGTGGATTAGGACAGATTAATCATATACATCAAGGACATGTTGGATATGGTTCATCATCTTCATCTTCATCTTTAGGTGTTGTTAATGTGTTGAGAAATTCAAAATATGTTAAAGCTGCTCAAGAATTGCTTGAAGAGTTTTGTAGTGTTGGAAGGGGTCAATTCAAGAAGAATAAATTTAGTAGACAATTATCAAACCCTAATTCAAATCAAGGTGGTGGTGGTGGTGGTGGTAGTGTTGGTGGTGGTGGTGCTTCTTCATCTTCTTCAAAAGATGTTTCACCTTTATCACCTGCTGATAGGATTGAGCATCAAAGAAGGAAGGTCAAACTTCTAACCATGCTTGACGAGGTGGATAGAAGATACAGTCACTACTGTGAACAAATGCAAATGGTGGTGAACTCATTTGATTTAGTAATGGGATTTGGTGCAGCAGTTCCATACACAGCACTAGCTCAGAAAGCAATGTCACGCCATTTTCGTTGTTTAAAGGATGCAATAACAGCACAATTGAAACATAGTTGTGAGTTATTGGGAGATAAAGATGGTGTGGGGACCTCTGGTTTGACCAAAGGAGAGACACCAAGACTTAAGCTACTTGAACAAAGCTTAAGACAGCAAAGAGCATTTCATCAAATGGGGATGATGGAACAAGAAGCTTGGAGACCACAGAGAGGATTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTTGAACATTTTCTTCATCCGTACCCTAGTGATGCAGATAAGCATCTCTTGGCAAGACAGACTGGCCTTTCCAGAAATCAGGTGTCAAACTGGTTCATTAATGCAAGGGTACGTTTGTGGAAACCCATGGTAGAAGATATGTACCAACAAGAACTTAAAGAAGCAGAAGGATCATCAGAAGGAGATCAAGAAGATAGAGAAAATAATAAGAATCAAATTCAAAGCAGTACTAGCAACAACAACACAAGTGGTCACATAGCTACTACAACAACAAATATTGCACAAACTCCAACACAACCTTCAACAACAACAACAACAACACCACAACCTACAAGCAACAACAATACTATCAATGCCAATGAAAACGACCCATCACTTACACCAATATTAAATAGACAAGGCTTCTCGGAAAACCAAGCAATATTGTTGCAACCCACCACCACCGTCAAAACCACCGTCTCTGAGGTGGCACCACCTATCTCCGATTCTATGGCTATTGATGACACGTGTCGACATGGCAGCTTTGAATATGGGACCACTGGTACCTCTGCTGACATTGGTTCTACACTTATCAGATTTGGTACCAATACTTCTGGTGACGTGTCACTCACTTTAGGGCTACGTCACGCCGGAAATTTGCCTGATAATAAAACACCTTTCTCTCTTACAGACTTTGGAGGCATTTAA 2421 0.4122 MGIATTPSSLPSTFSNSTNTHQYHNSILEKSQNSTNSMSQDYHHHHHQQGIFNFSNGFERSNTPVENNNPHQIQRDKVQVQDFDSQQQQQPPPPQLIGGIEEEQEPLPVYETTGMLSEMFNFPHGASAAELLEQQQQQQQQQQMASTRTPSPHGIANSSDWYGTRQTILTDSKNHHNNRDSSSSSSIFHHQNHHQMSNINAESAAAMQLFLMNPQTTRSPSPPPPSTNSSTLHMLLPNHSTTNLQGFGSGAGGSFGQFTWSQEGGGTTSHHQLNNNQPEMASVVEGQGLSLSLSSSLQHHHSEDLRMGDAAAGGFLYYNQGGPGTSYKNLSGVHHHLQGGGLGQINHIHQGHVGYGSSSSSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFSRQLSNPNSNQGGGGGGGSVGGGGASSSSSKDVSPLSPADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGDKDGVGTSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGSSEGDQEDRENNKNQIQSSTSNNNTSGHIATTTTNIAQTPTQPSTTTTTTPQPTSNNNTINANENDPSLTPILNRQGFSENQAILLQPTTTVKTTVSEVAPPISDSMAIDDTCRHGSFEYGTTGTSADIGSTLIRFGTNTSGDVSLTLGLRHAGNLPDNKTPFSLTDFGGI* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3506 806 Pfam Homeobox KN domain 577 616 IPR008422 GO:0003677|GO:0006355
Mal5g3506 806 Pfam Associated with HOX 369 507 IPR006563 -
Mal5g3506 806 SMART HOX_1 560 624 IPR001356 GO:0003677
Mal5g3506 806 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 214 233 - -
Mal5g3506 806 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 99 793 - -
Mal5g3506 806 ProSiteProfiles 'Homeobox' domain profile. 557 620 IPR001356 GO:0003677
Mal5g3506 806 MobiDBLite consensus disorder prediction 648 708 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 630 647 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 77 94 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 132 171 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 132 193 - -
Mal5g3506 806 SUPERFAMILY Homeodomain-like 562 627 IPR009057 -
Mal5g3506 806 SMART prehox3 364 508 IPR006563 -
Mal5g3506 806 MobiDBLite consensus disorder prediction 179 193 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 77 100 - -
Mal5g3506 806 CDD homeodomain 560 621 IPR001356 GO:0003677
Mal5g3506 806 MobiDBLite consensus disorder prediction 630 708 - -
Mal5g3506 806 Gene3D - 563 625 - -
Mal5g3506 806 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 99 793 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 400 414 - -
Mal5g3506 806 MobiDBLite consensus disorder prediction 400 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3506 Mal-Chr5 100622008 100629346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3506 364 806 Homeobox Transcription Factor Family AT2G23760 54.125 3.06e-151 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal5g3506 POX 3e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3506 - - mtr:MTR_8g078480 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3506 5 100622008 100629346 Mal5g3506 5 100622008 100629346 ECH
Mal7g1361 7 42750736 42759116 Mal5g3506 5 100622008 100629346 PCT