Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3488 ATGAAGACTCCGAGCAAGAAAAACAAAGGAACTCAAGACGAAGAGGGTGAAACTAATGGAGGTGATCCATATATGTCCGAAAGCAATGTAGCTGATCTGCCTTTGACCAAAAGTAATGATGATCAACATTTGATCAAAAGCAATAAAAGTGAAGATGACGAGCAGGGCAAAAAGAAAAATAAAAAGAAGAAACAGAGTGAAGAAAGCAAACATAAGGAGGATAACACGTACAAAAGCAATGAGTTTGAAGATGATGACCAAAGAAAGAAGATGAAAAAGATGCGGGAGCTAATTGAAGGAAACACACTGAAGGAGTGTAATGACGTTAGAAGCGACGAAGGTGAAGAAGGCCAGCAGGGCAAGAAGAAAAAGAAGAAATTGAGTGAAGAAAGCAAACATAAGGAGTCTAACAAGTTCAAAAGCAATGAATGTGAAGATGATGACCAGGGAAAGAAGATGAAAAAGAAGCAGAAGCTAATTGAAGGAAACACACTGAAGGAGTGTAATGACTCTAGAAGCAAAGGTGATGAAGATGGCAAGCAAGAGAACAAGATGAAGAAAAAGAAGAAGAAACCAAGTGAAGAAAGCAATGAATGTGAAGATGACCAAGGAAAGAGGACGAAAAAGAACCAGAAACTAATCGAAGGAAACACACTTAATGAGTGTAACGACTTAAGAAGCAATGGAGGTGAAGATGGTGAGCAAGACAAGATGAAGAAAAAGAAGAAATTAAGTGAAGAAAGTAAACATAAGGAGAATAGTGAGTTTAAAACCAGTGAGTGTGAAGATGATGGCCAAGGAAAGAAAATGAAGAAGAAGAAGAAACAAATCGAGGAAGCCAAACTTAAGGAGTACAGTGACATTATAATCAACGAAGGTGGAGATGGTGACCAAGGCAAGGCGAAAAAGAAGGATAAACTGAGTCACAAAAGGAAAAGTAAGGAGAACAATGATCAAGGCAAAAAGATGAAGAAAAAAAAGGAAGCAAAGGCAGTTGCAAGTGAGTCTCCTAACTGTGCACATGATAAAGGCAAGACGAAGAAGGATAAATTAAGTCGCAAAAGGAAAAGTAAGGAGAACAATGATTTAAACAGCAATGAAGGTGATGCTGTCACTGGAGTTAATGATCAAGGCACAAAGATGAAGAAAAAAAAGGAAGCAAAGGCAGTTGCAAGTGAGTCTCCTAACTGTGCACATGATAAAGGCAAGACGAAGAAGAAGGATAAATTAAGTCGCAAAAGGAAAAGTAAGGAGAACAATGATTTAAACAGCAATGAAGGTGATGCTGTCACTGGAGTTAATGATCAAGGCACAAAGATGAAGAAAAAAAAGGAAGCAAAGGCAGTTGCAAGTGAGTCTCCTAACTCTGCACATGGTAAAACTCCTAACTCTGGACATAATGGAACATCTAAACGCAAACGAGTAACTTTTGCTGATGAAGTGGAGACGCATTGTTGTGACGGCTTAGTGCGTGGGAAAAGGTATACACCTGAAGAGGATGAGAAGATCAAAGCAGCTGTTTATGACTATATAGATTCTCATGGTTTGGGAGATGAAGGTCTAGATAAGATTCTTCATTGCAGATCACACCCTGAGCTTATCGGCTGTTGGAAAGAAATTGCAAAAGCCTTACCTGAGAGGCCTGCCGAGAGTGTGTATAAACGTGCTCATTCTTTGTTAGAAAACAGTGAGAGGTGTAAGTGGACACCTGATGAGCTTGAATTTATACGAAAGAGCTACGAGAAACATGGAGCTGATTGGAGGATGGTAGCTGAGGCTTTGGATAAAAGTCGAGATCAGGTAAAAGATGCGTGGCGCAGAATAAAATATACCAATGTAAGGAGAGGAACTTGGTCCCAAGAGGAGTATCAAAATTTATTTAATTTAGTAAACCTGGATCTGCGCGTGAGGGCTTCAGAGCCTTATAAAAAATCAAACCATGGTATGTTGCGAGATAATATTTGTTGGGAGACAATTGCTCACAAATTGGGGACCCGAAACAGTGCACTTTGCTGCAAGAAGTGGTACGAGGAGTTAACATCGCCAATGGTTGCTAGTGGTGATTGGTGTGATACTGATGACTACCGCTTGATAAATGCTTTATATACTTTAGATGCTTGCTGCATGGAGGAGGTAGACTGGGACAATCTACTCGAGCTTAGGTCTGGTGATGCATGCAGAAAACGATGGGATCAAATGGTCCACCATATTGGGGAGCATACAGCCAAGTCATTCGTTGAGCAGGTTGAAGTTCTTACAAAGAGATTCTGCCCTGACTTGTTGGAAGCAAGAGAGGCCTTTGACAACAAACCTGTGATTTGTTGA 2325 0.4022 MKTPSKKNKGTQDEEGETNGGDPYMSESNVADLPLTKSNDDQHLIKSNKSEDDEQGKKKNKKKKQSEESKHKEDNTYKSNEFEDDDQRKKMKKMRELIEGNTLKECNDVRSDEGEEGQQGKKKKKKLSEESKHKESNKFKSNECEDDDQGKKMKKKQKLIEGNTLKECNDSRSKGDEDGKQENKMKKKKKKPSEESNECEDDQGKRTKKNQKLIEGNTLNECNDLRSNGGEDGEQDKMKKKKKLSEESKHKENSEFKTSECEDDGQGKKMKKKKKQIEEAKLKEYSDIIINEGGDGDQGKAKKKDKLSHKRKSKENNDQGKKMKKKKEAKAVASESPNCAHDKGKTKKDKLSRKRKSKENNDLNSNEGDAVTGVNDQGTKMKKKKEAKAVASESPNCAHDKGKTKKKDKLSRKRKSKENNDLNSNEGDAVTGVNDQGTKMKKKKEAKAVASESPNSAHGKTPNSGHNGTSKRKRVTFADEVETHCCDGLVRGKRYTPEEDEKIKAAVYDYIDSHGLGDEGLDKILHCRSHPELIGCWKEIAKALPERPAESVYKRAHSLLENSERCKWTPDELEFIRKSYEKHGADWRMVAEALDKSRDQVKDAWRRIKYTNVRRGTWSQEEYQNLFNLVNLDLRVRASEPYKKSNHGMLRDNICWETIAHKLGTRNSALCCKKWYEELTSPMVASGDWCDTDDYRLINALYTLDACCMEEVDWDNLLELRSGDACRKRWDQMVHHIGEHTAKSFVEQVEVLTKRFCPDLLEAREAFDNKPVIC* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3488 774 SUPERFAMILY Homeodomain-like 659 738 IPR009057 -
Mal5g3488 774 MobiDBLite consensus disorder prediction 42 212 - -
Mal5g3488 774 ProSiteProfiles Myb-like domain profile. 610 679 IPR001005 -
Mal5g3488 774 Gene3D - 492 567 - -
Mal5g3488 774 Gene3D - 569 608 - -
Mal5g3488 774 MobiDBLite consensus disorder prediction 227 303 - -
Mal5g3488 774 MobiDBLite consensus disorder prediction 1 16 - -
Mal5g3488 774 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 565 613 IPR017930 -
Mal5g3488 774 Pfam Myb-like DNA-binding domain 568 626 - -
Mal5g3488 774 CDD SANT 567 609 IPR001005 -
Mal5g3488 774 MobiDBLite consensus disorder prediction 1 472 - -
Mal5g3488 774 CDD SANT 494 560 IPR001005 -
Mal5g3488 774 SUPERFAMILY Homeodomain-like 539 621 IPR009057 -
Mal5g3488 774 MobiDBLite consensus disorder prediction 454 471 - -
Mal5g3488 774 ProSiteProfiles Myb-like domain profile. 560 609 IPR001005 -
Mal5g3488 774 MobiDBLite consensus disorder prediction 311 332 - -
Mal5g3488 774 Gene3D - 609 684 - -
Mal5g3488 774 SMART sant 614 681 IPR001005 -
Mal5g3488 774 SMART sant 491 562 IPR001005 -
Mal5g3488 774 SMART sant 564 611 IPR001005 -
Mal5g3488 774 ProSiteProfiles Myb-like domain profile. 681 734 IPR001005 -
Mal5g3488 774 PANTHER GB|AAC33480.1 233 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3488 Mal-Chr5 100261025 100263349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3488 563 700 MYB Transcription Factor Family AT4G32730 26.429 1.41e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g3488 Myb_DNA-bind_6 1.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3488 - - mtr:MTR_8g077990 862.833