Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3484 ATGAGAGTTCCTCCTCCTGCAGTTTCCTCATCATCATCACCACAACCAAAAATCACCACCACTCAGAACATCGTCGTTAACGTTCCAACTTCCAACCCAACACCAACAACCACCACCTTGTGCTACGAACCCCGTTCCGTTCTCGAACTTTGTCGTAGTCCTAGCCCTGAAAAGAAACCAACTCAACAAGAACAAGAACATAATCCAGAAGTGGAAGAGGATCATGCTGCCTTGCCTAATTTGGATTGGTGGGATTCCATCATGAAAGATTTAGGTTTACAAGACGACTCTTCAACTCCCATAATACCACTTTTGAAAAATACCAATAATACCTCAGAGATTTACCCTAACCCTTCTCAAGACCAATTTGATCAAACCCAAGACTTCACTTCTCTCTCAGATATTTACTCTAATAACCAAAACCTGGCCTATAATTACCCTAACACAAACACTAATCTGGATCATTTGGTTCTTGACTTCAATAACAATCAACCCAACAACAATAACAGTAATTGGGATTTCATTGAAGAGCTTATTCGTGCCGCGGATTGTTTCGATAACAACCATCTTCAACTAGCTCAAGCAATATTAGAGAGGCTCAATCAACGGCTACGATCTCCAACCGGTAAACCGCTTCACCGCGCCGCGTTTCATTTCAAAGACGCTCTTCAATCTCTTCTCTCCGGTTCAAACCGGACTAATCCACCGCGTCTTTCTTCCATGGTTGAGATTGTTCAAACCATAAGAACCTTCAAGGCCTTTTCTGGAATTTCACCTATTCCAATGTTTTCAATTTTCACTACAAACCAAGCTTTACTCGAAGCTTTGCATGGATCATTATACATGCACGTTGTTGATTTCGAAATCGGACTCGGAATTCAATACGCTTCTCTTATGAAAGAGATTGCTGAAAAAGCTGTTAACGGTTCGCCGTTACTTCGTATCACCGCCGTCGTACCGGAGGAATACGCCGTTGAAAGCCGGTTGATTCGTGAGAATCTGAATCAATTCGCGCATGATCTTGGAATTCGTGTGCAGGTTGATTTTGTGCCGTTAAGGACTTTTGAAACGGTGTCGTTTAAGGCGGTTAGGTTCGTCGACGGGGAGAAGACTGCGATTCTGTTAACGCCGGCGATATTCTGCCGGCTTGGATCCGACGGTACGGCGGCGTTTCTTTCGGATGTCAGGAGGATAACTCCTGGTGTGGTGGTATTTGTCGACGGTGAGGGATGGACGGAGGCTGCGGCGGCAGCGTCGTTTCGTCGTGGAGTGGTGAATAGTTTGGAGTTTTACTCGATGATGCTGGAGTCGTTGGATGCGTCGGTGGCGGCGGGAGGAGGAGGAGAGTGGGCGAGGAGGATTGAGATGCTTTTGCTTCGGCCGAAGATAATTGCGGCCGTGGAGGCTGCCGGAAGAAGAACGACGCCGTGGAGAGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTGCAGTTGAGTCAGTTTGCGGATTTTCAGGCGGAGTGTTTGCTTGCGAAGGTGCAAATCAGAGGCTTCCACGTGGCGAAACGACAGGCTGAGTTGGTGCTTTTTTGGCATGAGAGGGCAATGGTTGCCACGTCAGCTTGGAGGTGTTAG 1614 0.474 MRVPPPAVSSSSSPQPKITTTQNIVVNVPTSNPTPTTTTLCYEPRSVLELCRSPSPEKKPTQQEQEHNPEVEEDHAALPNLDWWDSIMKDLGLQDDSSTPIIPLLKNTNNTSEIYPNPSQDQFDQTQDFTSLSDIYSNNQNLAYNYPNTNTNLDHLVLDFNNNQPNNNNSNWDFIEELIRAADCFDNNHLQLAQAILERLNQRLRSPTGKPLHRAAFHFKDALQSLLSGSNRTNPPRLSSMVEIVQTIRTFKAFSGISPIPMFSIFTTNQALLEALHGSLYMHVVDFEIGLGIQYASLMKEIAEKAVNGSPLLRITAVVPEEYAVESRLIRENLNQFAHDLGIRVQVDFVPLRTFETVSFKAVRFVDGEKTAILLTPAIFCRLGSDGTAAFLSDVRRITPGVVVFVDGEGWTEAAAAASFRRGVVNSLEFYSMMLESLDASVAAGGGGEWARRIEMLLLRPKIIAAVEAAGRRTTPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3484 537 PANTHER SCARECROW-LIKE PROTEIN 15 13 536 - -
Mal5g3484 537 MobiDBLite consensus disorder prediction 59 77 - -
Mal5g3484 537 ProSiteProfiles GRAS family profile. 165 536 IPR005202 -
Mal5g3484 537 MobiDBLite consensus disorder prediction 1 43 - -
Mal5g3484 537 Pfam GRAS domain family 175 536 IPR005202 -
Mal5g3484 537 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 536 IPR005202 -
Mal5g3484 537 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3484 Mal-Chr5 100215619 100217232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3484 74 536 GRAS Transcription Factor Family AT4G36710 55.258 1.01e-167 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g3484 GRAS 2e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3484 - - cam:101510420 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3484 5 100215619 100217232 Mal5g3484 5 100215619 100217232 ECH