Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3479 ATGCCAAACAAAACTCCAGATAATCAAACACCTGATGACGCTACACCTGATGACGCTGATGGATCAGATTCTAGAAATTCACAACCTGCGCCTTCTGAAAGAGGAAACAGTTCACCTTCTTCTGAAGGAGGAAACACATCACCTCCTTCTGGAGGAGGGAACATTTCACCTCCTTCTGAAGGAGGGAACAATCCGCCTTCTTCAGGAGGAGGGAACAATCCACCTTCTTCAGGAGGAGGGAACAATTCACCTTCTTCAGGAGGAGGGAACAATTCACCTTCTTCAGGAGGAGGGAACAATTCACCTTCTGGAGGATGGAACAATTCACCTCCTTCAGGAGGAGGGAACAATTCACCTCCTTCAGGAGGAGGGAACAATTCACCTTCTGGAGGAGGGAACAATTCTCCTTCAACACAAAATGCAGATTCATTAAATAACAATGGCAAATCCTCCTCCTCCTCTTCCTCATCCTCTTCTGATTCACATAGTACGAATAAGGAGGATAATAGCAAAGTACTAGTTGGAGTTGCTATTGGAGCAGTGGTTGTCATTCTTTTAGTCGTTGGTTTTTGTTTCATTAGGTCAAGGAAGAAGAAGAGAAAGCAAAATTATTATTATGGTCCTCAAGATCCTTCACTTGGAAAAGGGAGCAATTATTACAACAGTGGACAACATCCTCTTCCTCCTCATCATCCAAATTGGCAAGGAGGTCCAGGTCAACATGGAATGGACCATGTTGTTAGAGTCCAACAAACACCTCATGGAGGAAGTGGTGTTTGGGGTGCACCACACCCTCTAATGAATAGTGGTGAAATGGGTTCCAATTACTCATATGGAATGGGGCCACCAGGTTCTATACCACCTCCTTCTCCAAACCTATCTCTTACTCTCAAGGGTGGTACATTCACTTATGAAGAATTGGCATCTGCTACTAAAGGATTTGCTAATGAGAATATTATAGGACAAGGTGGTTTTGGTTATGTTCATAAAGGAATTTTGCCTACTGGAAAGGAAGTTGCTGTTAAAAGTTTAAAAGCAGGTAGTGGACAAGGCGAACGCGAGTTCCAGGCTGAGATTGATATCATTAGTCGTGTTCATCATCGCCATCTTGTATCGCTTGTTGGATATTGTGTTTCTGGTGGACAGAGAATGTTGGTCTATGAATTTGTTCCAAATAAAACTTTGGAATATCACCTTCATGGAAAGGGTGTTCCTACCATGGATTGGCCTACTAGAATGAAAATTGCATTAGGATCTGCTAGAGGGCTTGCTTACCTTCATGAAGATTGTAGTCCTCGCATTATCCACCGTGATATTAAGGCTGCTAATGTCCTAATTGATGATAGCTTCGAAGCTAAGGTGGCTGATTTTGGATTAGCTAAGTTAACTACTGATACTAATACGCACGTCTCAACTCGTGTCATGGGAACATTCGGGTACATGGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTTATGTTACTAGAACTCTTAACTGGGAAACGACCTTTGGATTTGACCAATGCCATGGATGAAAGCTTAGTTGACTGGGCTCGACCACTTTTGAATCGTGCATTGGAGGAGGATGGAAACTTTGCTGAATTGGTTGATCCATTTTTGGAAGGAAAGTACAATCATCAAGAAATGATAAGATTGGCTGCTTGTGCTGCTAGTAGCATTCGTCATTCTGCTAAGAAACGTTCAAAAATGAGCCAGATAGTAAGAGCATTAGAAGGAGATGTATCACTAGAAGACTTAAAGGAAGGGATGATAAAATCTTCAGGGCATACCAATGCTTATACCTCTTCAAGCCCAGAATATGATACAGTGCAATACAATGCAGATATGATGAAGTTCAGACAAGCAATAATGTCAAGTCAAGAATTTGGTGATAGTGGTGAGCTCCCTAGTAAGGAAATGGGTCGTCACTAG 1962 0.422 MPNKTPDNQTPDDATPDDADGSDSRNSQPAPSERGNSSPSSEGGNTSPPSGGGNISPPSEGGNNPPSSGGGNNPPSSGGGNNSPSSGGGNNSPSSGGGNNSPSGGWNNSPPSGGGNNSPPSGGGNNSPSGGGNNSPSTQNADSLNNNGKSSSSSSSSSSDSHSTNKEDNSKVLVGVAIGAVVVILLVVGFCFIRSRKKKRKQNYYYGPQDPSLGKGSNYYNSGQHPLPPHHPNWQGGPGQHGMDHVVRVQQTPHGGSGVWGAPHPLMNSGEMGSNYSYGMGPPGSIPPPSPNLSLTLKGGTFTYEELASATKGFANENIIGQGGFGYVHKGILPTGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCVSGGQRMLVYEFVPNKTLEYHLHGKGVPTMDWPTRMKIALGSARGLAYLHEDCSPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDTNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVMLLELLTGKRPLDLTNAMDESLVDWARPLLNRALEEDGNFAELVDPFLEGKYNHQEMIRLAACAASSIRHSAKKRSKMSQIVRALEGDVSLEDLKEGMIKSSGHTNAYTSSSPEYDTVQYNADMMKFRQAIMSSQEFGDSGELPSKEMGRH* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3479 653 Gene3D Phosphorylase Kinase; domain 1 292 389 - -
Mal5g3479 653 ProSiteProfiles Protein kinase domain profile. 314 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3479 653 Gene3D Transferase(Phosphotransferase) domain 1 390 603 - -
Mal5g3479 653 MobiDBLite consensus disorder prediction 21 163 - -
Mal5g3479 653 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 81 652 - -
Mal5g3479 653 SMART serkin_6 314 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3479 653 Pfam Protein tyrosine and serine/threonine kinase 317 516 IPR001245 GO:0004672|GO:0006468
Mal5g3479 653 PANTHER RECEPTOR-LIKE KINASE 81 652 - -
Mal5g3479 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Mal5g3479 653 SUPERFAMILY Protein kinase-like (PK-like) 289 587 IPR011009 -
Mal5g3479 653 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Mal5g3479 653 MobiDBLite consensus disorder prediction 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3479 Mal-Chr5 100078143 100082179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3479 171 643 Trihelix Transcription Factor Family AT1G70460 49.896 5.46e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mal5g3479 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3479 - - gmx:100805872 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1149 6 17640486 17644283 Mal5g3479 5 100078143 100082179 ECH
Mal5g3479 5 100078143 100082179 Mal5g3479 5 100078143 100082179 ECH