Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3464 ATGGAGTGTGGAAACGTGTCATTGAAAAGCATATTCTGCAAACTCAAGGGGATAAAAAATGGAACATCAAAGCAGGGTGTAGAGAACAAGCATTGGCTCTATCGGTCAAATTCCCATGATGCAACTCCAATTGAACCTATTCAACAGGGACAATGGGCAAGTCTACCACCTGAATTGCTTTTGGACATAATTCGTAGGGTTGAAGAGAGTGAGATATCTTGGCCTGCGCGTGCCATTGTTGTCTTTTGTGCTTCGGTATGTAAATCATGGAGGTCTGCCACTTTAGAGATCGTCAAGACTCCGCTGCAATGTAGAAGGATTACATTTCCTATTTCATTGAAGCAGCCCGGTCCCCGTGATCATCCGATAGAGTGCTTTATTAGGAGGAACAAAAGAACTTCTACATTCATGTTGTACTTAGGTCTGGCGCCATCGGAAAATGAGAGTAATAAGTTGTTATTAGCCGCTAAAAGGACAGCAAGGTTCGACTTTGTCATATCCTTGGCAGCAGACGATTTTTCTCAAGCCAGCAACAAATATGTTGGTAAAGTGAGGTCTAATTTTCTGGGTGCCGATTTCACTATATACGACAGTCAACCTCCACATGATGCTGCAGTTCAATCAAATTGTAGCCATCTTGTTAGCACCATTTGTTATGAGTTTTTCACTAGAAAGCCAAGAAGAATGCATTGCATCATGAATTCTAACATCGTTACCACTATTCAAGAAGGGGGAAATGCCCCATCTCGAATATTGTTACCTCAAATATTTGATGAACCTTTTTCTCCTTCACCAACACCGAAGGGAAAAAGTTCAACGACAATTTCATACTCTGCAAGCTCATCAAAGCTACCAGGACTGAGCCAAGGCTTGGTCAAGCCCTTGTTACTCAAAAGCAAGGATTGCATATGGAATGAGGACCGCGAGTCTTGGTGTCTAAACTTCATGGACCGTGTTACAATGTGCTCTGTAAAGAACTTTCAACTAATAGAATATGTTGATCCATCCCATAATGTTTCTCCTGTAGAGCAAGAAAAGATAATCTTGCAGTTTGGAAAGATTGGAAAAGATATATTCACCATGGACTACTCTTATCCACTCTCTGCCTTCCAAGCCTTTGCCATCTGCTTGACATCAATGAGAGCCCGCAAACTACATCTGTGA 1164 0.4184 MECGNVSLKSIFCKLKGIKNGTSKQGVENKHWLYRSNSHDATPIEPIQQGQWASLPPELLLDIIRRVEESEISWPARAIVVFCASVCKSWRSATLEIVKTPLQCRRITFPISLKQPGPRDHPIECFIRRNKRTSTFMLYLGLAPSENESNKLLLAAKRTARFDFVISLAADDFSQASNKYVGKVRSNFLGADFTIYDSQPPHDAAVQSNCSHLVSTICYEFFTRKPRRMHCIMNSNIVTTIQEGGNAPSRILLPQIFDEPFSPSPTPKGKSSTTISYSASSSKLPGLSQGLVKPLLLKSKDCIWNEDRESWCLNFMDRVTMCSVKNFQLIEYVDPSHNVSPVEQEKIILQFGKIGKDIFTMDYSYPLSAFQAFAICLTSMRARKLHL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3464 387 PRINTS Tubby superfamily signature 208 235 IPR000007 -
Mal5g3464 387 PRINTS Tubby superfamily signature 315 331 IPR000007 -
Mal5g3464 387 PRINTS Tubby superfamily signature 344 363 IPR000007 -
Mal5g3464 387 PRINTS Tubby superfamily signature 164 180 IPR000007 -
Mal5g3464 387 PRINTS Tubby superfamily signature 365 387 IPR000007 -
Mal5g3464 387 PRINTS Tubby superfamily signature 180 204 IPR000007 -
Mal5g3464 387 PRINTS Tubby superfamily signature 297 314 IPR000007 -
Mal5g3464 387 SUPERFAMILY Tubby C-terminal domain-like 102 383 IPR025659 -
Mal5g3464 387 SUPERFAMILY F-box domain 45 94 IPR036047 GO:0005515
Mal5g3464 387 Pfam Tub family 113 380 IPR000007 -
Mal5g3464 387 PANTHER TUBBY-LIKE F-BOX PROTEIN 2 24 383 - -
Mal5g3464 387 PANTHER TUBBY-RELATED 24 383 - -
Mal5g3464 387 Pfam F-box domain 52 97 IPR001810 GO:0005515
Mal5g3464 387 Gene3D - 45 106 - -
Mal5g3464 387 Gene3D Tubby Protein; Chain A 112 380 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3464 Mal-Chr5 99730829 99732539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3464 6 383 TUB Transcription Factor Family AT2G18280 51.365 2.27e-127 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mal5g3464 Tub 1.6e-73 CL0395