Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3459 ATGAAATATAGGCTTTTAAACCAAGCAATTTGGTTCAAGTGGGAAAAAGCAGATTCAGCGGAAGAAAGGAACAAAATTTGGCGAAATATTCTGTTAGTTCAATTAATTTCGTTGTTCCCACAACAGTCCAAACACAACTTGACAGTCGTGCAACTTGGGATCTCAATTTTTTTATATAGCTTAACAAGATCTCAGTTATTACATCATTCCAACGATTGGGATATTAAATACTTCAAACCGACTAAAACTATATTTGTTTCTGCTATTGGAACAGTCATCATGACAATGTTTAATGATGTCGAAAATGTTGAGCAAGCTGTTTGCTCTGAGACATATCAAGGAGAAGCTTATGGACATAATGAAGAGCTCATTTGTGTTGAAAATCGCGAATATGATGTATCAAAACTTGATGATGAACTCAGTAGTGGTTCAGTTGTAATGGAAGGGCCTCATAAAGAAAGCCAAATGGATTCATCTAGCTTGCGAGAATCAGAAGAAATGATCTTGTTCAGCAGTGAAACAGTATCAAGGCCTGTGGATGAAATGGCTATTCAAACATTTGTAGAACCTAGCACTATGGATCGACAATGTGTAGCATATATCGAAGCCAAGGGAAGGCATTACAAACGTGTTAAAGTTGTTACTCCAATTTGTGGAGCTACAACTGTTGCTGGTACCAAATGTAAGTGTCATTCCCTTCCTGGATTTTACTTTTGTAAGAAACATTGGCACAACCCTGAGATGGGTCAGACCTCAAATTCAATCTTTCCTACATTAAATAGGAAAGCTGAAGAAAATTGCAGTGGTTCCCAGAGCCTGTTTTGCAAAGACTTGGTGTTGGTACCTCCAGAAAGTCCATTGGAGATCGATCCAGTGTCGGTTATCCAGCCTCATGTAAATGGGAAAACAAGTATTGTTGAATTGGAAGAATCTCAATGCTTAGAGGCTGCAGATATTTGGTTTTCTGGTACCCTTGTGAATTGGCATCAGGATGAGTTCATTTGTCCAAGAGGATGCAATGAACAAAACCTACAACCAGTCTCTCCCTTGGCATCACTTTCAGATGATCACCTCATCAATTCACGCCATATAAGATTTGGGTCGTCGCAAAAAGCTCTTGTGTTATGTGATGACATAAGCTTTGCGGTGGAATCAACTCCAGAGATATGTGTAATAGATCAACAAATTCTAAATTCTCTTTTTGAGCAAGAGCAATATGTAAAACCTGGTATATATGCCTTGGGAGATGTTTACCTATGTGACAAAGCCGATGGTCTGCAACTGGAATGTTATTGCGAATCTTCTACTTGCTGCAGTGAAACTTGTGAGCATGCATACCATTTTAATGATGATTATGATAATGAAAAAGACATATTCGGGGAACCAATGCACGGCAGGTTCGCATACGATGTAAATGGGCGAATCATATTGGAGGAGGGTTATATTGTGTTCGAGTGTAACGATAAGTGCAGATGCGATAAAACCTGTCCAAACAGAATATTGCAGAACGGAATTCGCGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGGAGTAAGGGCTGGTGAGGCTATTTTGCGTGGCACGTTCGTGTGCGAGTACATTGGAAAGGTTTTAGAAGAGCAGGAGGCACACAACAAACGCGGAAGACATGGCAAAGAAAATTGCAGTTATTTCTTTGACATTGATGCTCGCATTAACCATATGAGTAGATTGGTCGAAGGACAGGCCCGATATGTCATTGATTCTACTGAATATGGAAATGTGTCTAGATTCATCAATAACAGTTGTTCACCTAATCTTGTGGATTACAAAGTTCTTGTAGAGAGCACGGATTGTAAGCGTGCACATATCGGTCTTTACGCAAGTCGAGATTGCCGGGGTCGCCTGTACTAG 1902 0.398 MKYRLLNQAIWFKWEKADSAEERNKIWRNILLVQLISLFPQQSKHNLTVVQLGISIFLYSLTRSQLLHHSNDWDIKYFKPTKTIFVSAIGTVIMTMFNDVENVEQAVCSETYQGEAYGHNEELICVENREYDVSKLDDELSSGSVVMEGPHKESQMDSSSLRESEEMILFSSETVSRPVDEMAIQTFVEPSTMDRQCVAYIEAKGRHYKRVKVVTPICGATTVAGTKCKCHSLPGFYFCKKHWHNPEMGQTSNSIFPTLNRKAEENCSGSQSLFCKDLVLVPPESPLEIDPVSVIQPHVNGKTSIVELEESQCLEAADIWFSGTLVNWHQDEFICPRGCNEQNLQPVSPLASLSDDHLINSRHIRFGSSQKALVLCDDISFAVESTPEICVIDQQILNSLFEQEQYVKPGIYALGDVYLCDKADGLQLECYCESSTCCSETCEHAYHFNDDYDNEKDIFGEPMHGRFAYDVNGRIILEEGYIVFECNDKCRCDKTCPNRILQNGIRVKLEVFKTEKKGWGVRAGEAILRGTFVCEYIGKVLEEQEAHNKRGRHGKENCSYFFDIDARINHMSRLVEGQARYVIDSTEYGNVSRFINNSCSPNLVDYKVLVESTDCKRAHIGLYASRDCRGRLY* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3459 633 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 154 297 - -
Mal5g3459 633 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 355 627 - -
Mal5g3459 633 PANTHER SET DOMAIN PROTEIN 355 627 - -
Mal5g3459 633 SMART set_7 507 631 IPR001214 GO:0005515
Mal5g3459 633 ProSiteProfiles SET domain profile. 507 633 IPR001214 GO:0005515
Mal5g3459 633 Gene3D SET domain 358 629 IPR046341 -
Mal5g3459 633 SUPERFAMILY SET domain 367 627 IPR046341 -
Mal5g3459 633 Pfam SET domain 518 628 IPR001214 GO:0005515
Mal5g3459 633 PANTHER SET DOMAIN PROTEIN 154 297 - -
Mal5g3459 633 ProSiteProfiles Pre-SET domain profile. 428 504 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal5g3459 633 Pfam Pre-SET motif 405 499 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3459 Mal-Chr5 99666555 99677557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3459 323 627 C2H2 Transcription Factor Family AT2G23740 46.687 2.90e-86 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal5g3459 SET 1.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3459 - - mtr:MTR_8g078505 585.104