Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3385 ATGTCAACGGAACCGCCCAAGCAGTGGCAATGGGAGAACGCCATCGCTGGTGCCGCCGCCGGATTCGCAACTGTCGCCGTCATGCATCCCCTCGACGTTGTTCGAACTAGGTTTCAAGTTAACGATGGTCGAGCTTCTCATCTTCCTAGTTACAAGAACACTGCTCACGCCATTTTCACCATTACTCGCTCTGAGGGATTAAGAGGGCTATATGCAGGATTTCTTCCTGGGGTTCTTGGGTCAACTTTATCATGGGGTTTATATTTCTTTTTCTATGACAAAGCTAAACAAAGATATGCTAGAAGCAGAGAGGAGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCGGAAGCAGGAGCTTTGGTTTCCTTGTTCACAAATCCTGTTTGGCTAGTGAAGACAAGATTGCAGCTTCAGACTCCTATTCATCAGACACGGCCATACTCTGGGCTATATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCTGGTCTATTTCTGGTCTCTCATGGTGCTATTCAGTTCACAGCATACGAAGAGCTTCGTAAAACTATTGTTGATTTGAAGAGCAAGGGAAGTGACAAACAACATCAAAACCCTGATCAACTCTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAAGTTGCTGCAATACTCCTAACCTATCCATTTCAGGTTATACGGTCTCGTTTGCAGCAACGACCTGGTGGTGATGGGATACATAGATATATGGACAGTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAAGTGTACGAGGTTTTTACAAGGGAATCACGCCAAACCTCTTGAAAAACGTTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTCTAAAATTACTTAAACTGGCTAGAGGGAATGACTGA 939 0.4366 MSTEPPKQWQWENAIAGAAAGFATVAVMHPLDVVRTRFQVNDGRASHLPSYKNTAHAIFTITRSEGLRGLYAGFLPGVLGSTLSWGLYFFFYDKAKQRYARSREEKLSPGLHLASAAEAGALVSLFTNPVWLVKTRLQLQTPIHQTRPYSGLYDAFRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKTIVDLKSKGSDKQHQNPDQLLNSVDYAVLGATSKVAAILLTYPFQVIRSRLQQRPGGDGIHRYMDSWHVVKETARFESVRGFYKGITPNLLKNVPASSITFIVYENVLKLLKLARGND* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3385 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 195 IPR018108 -
Mal5g3385 312 Pfam Mitochondrial carrier protein 9 101 IPR018108 -
Mal5g3385 312 Pfam Mitochondrial carrier protein 107 197 IPR018108 -
Mal5g3385 312 Pfam Mitochondrial carrier protein 218 306 IPR018108 -
Mal5g3385 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 8 307 IPR044712 GO:0006862|GO:0055085
Mal5g3385 312 SUPERFAMILY Mitochondrial carrier 10 300 IPR023395 -
Mal5g3385 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 304 IPR018108 -
Mal5g3385 312 Gene3D Mitochondrial carrier domain 99 309 IPR023395 -
Mal5g3385 312 PANTHER BNAA09G07970D PROTEIN 8 307 - -
Mal5g3385 312 PRINTS Mitochondrial carrier protein signature 116 138 IPR002067 GO:0055085
Mal5g3385 312 PRINTS Mitochondrial carrier protein signature 23 41 IPR002067 GO:0055085
Mal5g3385 312 PRINTS Mitochondrial carrier protein signature 71 89 IPR002067 GO:0055085
Mal5g3385 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3385 Mal-Chr5 97836707 97844704 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3385 30 305 Chloroplast and Mitochondria Gene Families AT2G47490 39.223 8.50e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3385 K15115 - gmx:100809599 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3385 5 97836707 97844704 Mal5g3385 5 97836707 97844704 ECH