Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3375 ATGGCTGGTTTATTCTCATTAGGAGGAGGTGGAGGAGGAGGAAGAGGAAACCAACAAGAACAATCTCAACAACAAAGTCAAATTCCACCACAAGAGACTTTATTTTGGTACAGCAAAAATGAAGATATTTCATCTTACAGAGGAAATTTAGAATTATGGAACCAACACCAACACCAACAACAACAGCAGCAACAACAACAACAAGAAGATATGCATGGTGCACGGCCGTTTTTTCCGCGAGATCTCTACGGTCCGGGAGTTGGTTTAGGTGTTGGACCAAGCAGAGTTTCATCAGATGATCATGAACATCAATCATCATCTAGATCGGGTGCTGCTGCGTTTACGATGGCGATGAGATCATCATCTTCAGCAGAAGGGATAAGTTGTCAAGATTGTGGAAACCAAGCTAAGAAAGATTGTCCTCATATGAGATGCAGAACTTGTTGTAAGAGTCGTGGATTTCAGTGTCAAACACATGTTAAAAGCACTTGGGTTCCAGCTTCAAGACGCCGTGAACGTCAACAACAGTTATCTTCTTCTTTACCTTTGCAAAGAGATATTTCTAAACGACCTAGAGATGGTTCTAATGCTCTTGTTTCCACTCGTAATTTCAACTCAGGGCTAGAGGAAGCAAATTTTCCTGCTGTGGTAAGCTCTCCAGCGGAGTTTAGGTGTGTAAGGGTTAGTTCAATTGACGATGCAGATGATAGGTATGCATATCAAACGGCTGTCAACATTGGAGGACATTTGTTCAAAGGAATTCTCTATGATTTTGGTCCAGAAAGTAGTATCAACAATAACAACAACAATGATTATAATAATAGTAATTACATGATTGGGGAAACTTCCGGTGGCGGCGGTGTGGGCGTAGCTCAACCGTTGAACCTAATCGCCGACTCTGATACCACTGTTGTTGCCTCTTCTGGGACACTTGTTGATCCTTCTTCCTTGTATTCGGCTCCGATTAACGCCTTCATGACGGCTAGTGGTACGCAATTCTTCCCTCGCCCAAGATCTTGA 1020 0.4275 MAGLFSLGGGGGGGRGNQQEQSQQQSQIPPQETLFWYSKNEDISSYRGNLELWNQHQHQQQQQQQQQQEDMHGARPFFPRDLYGPGVGLGVGPSRVSSDDHEHQSSSRSGAAAFTMAMRSSSSAEGISCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPASRRRERQQQLSSSLPLQRDISKRPRDGSNALVSTRNFNSGLEEANFPAVVSSPAEFRCVRVSSIDDADDRYAYQTAVNIGGHLFKGILYDFGPESSINNNNNNDYNNSNYMIGETSGGGGVGVAQPLNLIADSDTTVVASSGTLVDPSSLYSAPINAFMTASGTQFFPRPRS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3375 339 MobiDBLite consensus disorder prediction 165 185 - -
Mal5g3375 339 MobiDBLite consensus disorder prediction 54 117 - -
Mal5g3375 339 Pfam Domain of unknown function (DUF702) 126 261 - -
Mal5g3375 339 MobiDBLite consensus disorder prediction 165 200 - -
Mal5g3375 339 MobiDBLite consensus disorder prediction 15 39 - -
Mal5g3375 339 MobiDBLite consensus disorder prediction 54 71 - -
Mal5g3375 339 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 337 IPR007818 GO:0003700|GO:0006355
Mal5g3375 339 PANTHER PROTEIN SHORT INTERNODES 1 337 - -
Mal5g3375 339 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 213 260 IPR006511 -
Mal5g3375 339 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 128 170 IPR006510 -
Mal5g3375 339 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3375 Mal-Chr5 97741122 97742963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3375 1 339 C2H2 Transcription Factor Family AT3G51060 45.501 2.69e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mal5g3375 DUF702 5.7e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3375 - - gmx:100781981 332.028