Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3372 ATGTCAACATATAGTGAAGCAACGTCGCCTCTTGATATATATAGTGATACAGAAGAGGAAGAAATTAATAGTGGTAATTATGTTGACACTGATAGTGAATATAGTGATACAGAAGAGGTGGAATTTAATAGTGGTAACCATGTTGACACCGATAGAGATACAGAAGATGTAGAAATCAATAGCGGCAACGATGTTCGTACTGATAGAGATGCAAACGGTGATGAATTCAACAGTGGTAATGATGTTTGCAGTGAGCAAGGGAAAGAGAACTCCAATGGTTACAAATGCATCAGTGATGTGACAGATAATGATATAAGAGGTATGGAATTCAACACAGAGAAAGAAGCTACACAGTTTTATGAAAATTTTGCCAAATTCCATGGGTTTGCCGTAAGAAAGGATGAAGTGCGGTATGATGCTAAAAAGGAGAACATGATTATGCGCCAATTAGTTTGCAATAAAGAGGGTGTTAATGATGGAAAAAATAAGAAGGATGGCAGCCGATCTAGGTCAACTATTCGAACTCGTTGTGGTGCTAAACTTCGAGTAGTAGCTCTCAAAGAATACAGACATAATGAATTATTGTCTGATTTCAAATCGTTCTATTATCATCCTATGTTGACAACTGCCTTACGGGGGTTTGAGTTAGAAGCTTCAAAGATATTCACGAGTAAAAAGTTTAAAGTTGTCAAAAAGGCGATAGAGGATGTTGCTGCTTTATCAGTCACTGAACGAGTTGATCAGGGAGACATTGTTATTTTCAAGGTTAATATATATCGAAAAAAAGATGTAGTTTTTTTGGTATACCTTGACAAGTTGAACACTAAATTTTTATGCGATTGTAGACGCTTCGAGCGCAGAGGGCTGCCATGTTCGCACATTATATGTGCCATGAAGTATGAGGACATGGATATGTTTCCTGAAAGTTTGATTTGCAAGAGATGGACAAAGACCGCAAAGAGTGATCACATCTCATCATTAGCGTCCCAAGAAGGTAATGATGAAAAAATGTCCATGTTTCGTCGAGGGGCACTTGCCGCTGCGTTCAATAGTCTATGTGATGTTTCTTGTAAGAGAGAAAGTGATTATAAGGAGGCTCTAGAAGGGATTTATAGTTTGTGTAATAAGATAAATACGCGTCATGAGGGAAATGGACATGGCAAGCAAAAGGCCAATAAATCTTTTACGGGTGATCCACTGATGGTGAATGCCAAAGGTTCCCATAGGAGTAAAAAGTCAACATCAAGGACAAGATGTTGTTCAAATTGTAGACTTCCTGGCCACACAATACGAAAGTGTCCAGAACTTGGTGGAACTGGTGTCGTATTTGAAGATCAAGAGAAGGAGGCTTCACCCATTGAGTCTGATAATGAATCAAAAAGTTTAAGTGGGTCAATGAGTAATGATATGAATGATGACATACACTCTGTAGCAGTGTCAAATGGTGGACAGGAAGTTGAGAAAAGAAATGGTACTAAGCGTAAGAGAGAATGTGACAATGTTGCTTTTTCAACACAAGATTATGTCAACAGAAGAAAAACAAAAACAGATACAAGCACAATAAAGGGTGACGCTTGTGTGACTCCAAATATCACAATCAACATTGATAGCAACGGTATGACTCGTGGCTTTGGACATGAAAATTCTACTCTCCAACCAGACAGCCACTGTGCAAGTTGGAACCATAGTGTCGGGTACGGTGCAAATTATTTTACTATGCACAACGGGATTCCAAATAATGGTGGATCAGTTTTCTCAGAATTCCCTCCGAGAACTATCCTCTCGTCGCATTCTAACACAATTCTGCATACCGGAACGCACAATGTTTCAAGTAATACACCGGTGGGTATTATGAATGTTAAATTTGTTAATTGTATTTAA 1881 0.3854 MSTYSEATSPLDIYSDTEEEEINSGNYVDTDSEYSDTEEVEFNSGNHVDTDRDTEDVEINSGNDVRTDRDANGDEFNSGNDVCSEQGKENSNGYKCISDVTDNDIRGMEFNTEKEATQFYENFAKFHGFAVRKDEVRYDAKKENMIMRQLVCNKEGVNDGKNKKDGSRSRSTIRTRCGAKLRVVALKEYRHNELLSDFKSFYYHPMLTTALRGFELEASKIFTSKKFKVVKKAIEDVAALSVTERVDQGDIVIFKVNIYRKKDVVFLVYLDKLNTKFLCDCRRFERRGLPCSHIICAMKYEDMDMFPESLICKRWTKTAKSDHISSLASQEGNDEKMSMFRRGALAAAFNSLCDVSCKRESDYKEALEGIYSLCNKINTRHEGNGHGKQKANKSFTGDPLMVNAKGSHRSKKSTSRTRCCSNCRLPGHTIRKCPELGGTGVVFEDQEKEASPIESDNESKSLSGSMSNDMNDDIHSVAVSNGGQEVEKRNGTKRKRECDNVAFSTQDYVNRRKTKTDTSTIKGDACVTPNITINIDSNGMTRGFGHENSTLQPDSHCASWNHSVGYGANYFTMHNGIPNNGGSVFSEFPPRTILSSHSNTILHTGTHNVSSNTPVGIMNVKFVNCI* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3372 626 SMART 26again6 277 304 IPR006564 GO:0008270
Mal5g3372 626 ProSiteProfiles Zinc finger SWIM-type profile. 266 302 IPR007527 GO:0008270
Mal5g3372 626 Pfam FAR1 DNA-binding domain 118 187 IPR004330 -
Mal5g3372 626 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 185 400 IPR031052 GO:0006355
Mal5g3372 626 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 98 183 IPR031052 GO:0006355
Mal5g3372 626 MobiDBLite consensus disorder prediction 13 38 - -
Mal5g3372 626 MobiDBLite consensus disorder prediction 1 90 - -
Mal5g3372 626 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 185 400 - -
Mal5g3372 626 MobiDBLite consensus disorder prediction 444 468 - -
Mal5g3372 626 MobiDBLite consensus disorder prediction 383 414 - -
Mal5g3372 626 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 98 183 - -
Mal5g3372 626 MobiDBLite consensus disorder prediction 40 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3372 Mal-Chr5 97617366 97620463 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g3372 FAR1 1.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3372 - - adu:107487303 213.001