Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3361 ATGGATATACTTCATCAAGCAAAAATCACACTAGAACCATTCCAAACAACACTATTATTGCTTCTCCCACTCACTTTGTTTCTACTACTAAATTTAGCATCAAAAATTCGCAAAAGAGCACCATATCCACCAGGACCAAAAGGGTTACCCTTAATAGGCAACATGAACATGTTGGACAAACTCACACATAGAGGCTTAGCAAATTTAGCAAAACAATACGGTGGCGTTTTGCACCTACGCATGGGGTTTATTCACATGGTAGCTATTTCAAACGCTGAAGCAGCGCGTGAAGTGTTGCAATTACACGACAACATATTTTCAAATCGCCCAGCGACAGTAGCTATAAGCTACCTCACTTATAACCGTGCTGACATGGCGTTCGCTCACTACGGTCCCTTTTGGCGTCAGATGCGGAAACTTTGTGTCATGAAACTCTTTAGCCGCAAACGCGCTGAGTCGTGGCAATCTGTTAGAGATGAAGTTGAATTTGTTATCACCAACATTAACAACAACTTGGGAAAGCCGGTTAACGTTGGTGAGTTGGTTTTTAATTTAACAAAAAACATCATCTACCGCGCGGCCTTTGGGTCGTGCTCGAAAGAAGGGCAAGATGAGTTCATTTCGATACTTCAAGAGTTTTCGAAATTGTTTGGAGCTTTTAATATTGCGGATTTTGTTCCTTGTTTGGGATGGGTTGATCCTCAAGGTTTGAATGCTAGGCTTGTTAAGGCTCGTGGTGCGTTGGATCGTTTTATTGATAAGATTTTTGATGAACATGTGGAGAAGAAGAGGAATATGGATGATTCTTGTGGTGATCATGAAGATAGTGATATGGTTGATGAATTATTGGTTTTTTACTGTGATGATGCTAAAGTGGATAATGAATCGGAAGATCTTCATAACTCCATTAAACTCACTAGGGATAATATCAAAGCCATCATCATGGATGTCATGTTCGGAGGAACAGAAACGGTAGCATCGGCAATGGAATGGGCAATGTCAGAGCTAATGAGAAATCCAGAAGAACTAAAACGCGTGCAACAAGAACTCGCCACAGTGGTTGGCCTAGATCGGCGCGTGGAGGAATCAGACATCGAGAAACTCACTTATCTAAAATGCGCCGTCAAAGAGACGTTGCGTCTTCACCCGCCGATTCCCCTTCTCCTCCACGAGACTGCAGAGGACGCCAAGGTTGGTGGTTATTTCGTTCCGAAAGGCTCGCGCGTGATGATAAATGCATGGGCTATAGGAAGAGACAAAGACTCGTGGGAGGATCCGGAAGAGTTTAGGCCCTCGCGGTTTTTGGATTTAAACGCACCCGATTTTAAAGGAAGCAATTTTGAGTTTATTCCATTCGGGTCAGGTCGAAGGTCTTGCCCCGGGATGCAATTGGGCCTTTATGCGTTGGACTTAGCTTTGGCGCATTTACTTCATTGTTTTAATTGGGAGTTACCGAATGGGATGAAGGCTAGTGAGATGGATACGAGCGATGTGTTTGGACTCACTGCTCCAAGAGCAAGTCGACTCGTTGCCGTCCCAGCTAAGCGTGTCGTGTGTCCTCTCTAA 1566 0.4406 MDILHQAKITLEPFQTTLLLLLPLTLFLLLNLASKIRKRAPYPPGPKGLPLIGNMNMLDKLTHRGLANLAKQYGGVLHLRMGFIHMVAISNAEAAREVLQLHDNIFSNRPATVAISYLTYNRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVEFVITNINNNLGKPVNVGELVFNLTKNIIYRAAFGSCSKEGQDEFISILQEFSKLFGAFNIADFVPCLGWVDPQGLNARLVKARGALDRFIDKIFDEHVEKKRNMDDSCGDHEDSDMVDELLVFYCDDAKVDNESEDLHNSIKLTRDNIKAIIMDVMFGGTETVASAMEWAMSELMRNPEELKRVQQELATVVGLDRRVEESDIEKLTYLKCAVKETLRLHPPIPLLLHETAEDAKVGGYFVPKGSRVMINAWAIGRDKDSWEDPEEFRPSRFLDLNAPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLALAHLLHCFNWELPNGMKASEMDTSDVFGLTAPRASRLVAVPAKRVVCPL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3361 521 Gene3D Cytochrome P450 35 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Mal5g3361 521 PANTHER CYTOCHROME P450 84A1-RELATED 8 521 - -
Mal5g3361 521 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 8 521 - -
Mal5g3361 521 SUPERFAMILY Cytochrome P450 43 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 Pfam Cytochrome P450 43 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mal5g3361 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3361 Mal-Chr5 97411726 97416035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3361 50 521 Monolignol Biosynthesis Gene Families AT4G36220 73.996 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3361 K09755 - gmx:100807448 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1068 6 16119507 16122395 Mal5g3361 5 97411726 97416035 ECH
Mal5g3361 5 97411726 97416035 Mal5g3361 5 97411726 97416035 ECH
Mal5g3361 5 97411726 97416035 Mal6g1068 6 16119507 16122395 PCT