Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3352 ATGATGGAGTCATGTGTCCCACCAGGATTTCGGTTTCATCCAACTGATGGAGAGCTTGTTGGTTATTATCTTAGAAAGAAAGTAGCTTCTCACAAGATTGATCTTGATGTTATCAAAGAGATCGATCTATATCGTATTGAACCATGGGATCTTCAAGAGAGATGTAGAATTGGGAATGAGGAGCAACATGAGTGGTATTTTTTTAGTCACAAAGATAAGAAATATCCGACGGGGACGAGAACGAATAGAGCTACAATGGCAGGGTTCTGGAAAGCAACAGGAAGAGATAAATCAGTGTATGAAAGAACAAAACTGATTGGAATGAGGAAGACACTCGTTTTCTACAAAGGAAGAGCACCTAATGGACAGAAAACTGATTGGATCATGCATGAGTATAGGCTTGAAACACTAGAAAATGCACCTCCACAGGCAAAAGGTTGGGTTGTGTGCAAAGCATTCAAGAAAAAAACCAATGTCCAAACAAAGACAAATGAAAGATGGGATCCAAGCAACTTATATGATGAGCAAACAAGTGGCATCATCTCAAGGGTGGAGCCCATTGACCTCATCTTAAGGCAGCCACAGAGGATTTCAGCTCAAAATTTCATGTACAAACAAGAGATAGAAGCAGAAGCAAATACCTTATTAAGTTTCATGCATTCAGAACAATTGGTACCTCTTCCTCAACTAGAAAGTCCCTCTTTAACAAAGAAGCAAAACTCAATGCCAATAATATCAGAAAATAGCAATAATGAATTTCAAAATGGATTATTACTCAACAAATCAGAGAAAGTGACTGATTGGAGGGATCTTGATAAGTTTGTGGCTTCTCAATTGAGTCAAGAAGATCATAGGGATGAAACAAGCTCAGACATGTCATTGTTGCTACTTCAAAGTAGTAGGGATGATGAAGAGAAAAAGTTAAGCTCGTTTTTAACTACAAGGTATGGATTATCTGCTGCAGATGCATGCACGGTGCAACTGATCTAG 990 0.3869 MMESCVPPGFRFHPTDGELVGYYLRKKVASHKIDLDVIKEIDLYRIEPWDLQERCRIGNEEQHEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETLENAPPQAKGWVVCKAFKKKTNVQTKTNERWDPSNLYDEQTSGIISRVEPIDLILRQPQRISAQNFMYKQEIEAEANTLLSFMHSEQLVPLPQLESPSLTKKQNSMPIISENSNNEFQNGLLLNKSEKVTDWRDLDKFVASQLSQEDHRDETSSDMSLLLLQSSRDDEEKKLSSFLTTRYGLSAADACTVQLI* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3352 329 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Mal5g3352 329 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Mal5g3352 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 293 - -
Mal5g3352 329 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Mal5g3352 329 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Mal5g3352 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3352 Mal-Chr5 97286628 97290614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3352 3 283 NAC Transcription Factor Family AT4G36160 63.844 9.87e-134 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal5g3352 NAM 4.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3352 - - aprc:113869508 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3352 5 97286628 97290614 Mal5g3352 5 97286628 97290614 ECH
Mal6g1046 6 15720750 15723562 Mal5g3352 5 97286628 97290614 PCT