Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3351 ATGTGTTATGATCCTCTTAGTCTTCAACATACTCAGAAAATTTTCTTTGATGCTTTGGAATCAAATTTTCCTCTTTCACCTAATCAACACCCTCTTGATGTTCTTGAGATTCCTGATAGCAGTTGTTGTGTTATTGATTCTGGTAATAGTTCTAATTCTAATGAGTTAAAGTCTCTTTCTCCTAATACACCAGTTTCTGGTGGTGATTCTGGTTTTAATTCAATTTCAAATGTGAAGTCTCATGATGGTGTTTTGGATTTGGATTCTTCTGAGACTAGGGTTTTAGCTCAGAATATTTTTAGTGATGTTGATTCTATTTTGCAATTTAGAAAAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAAATGCTCAGCTTTTTACTGGTTTTGAGAATGCCAATACTAATAATTTGGTGTCTCATGAGCCTAAGGGTAGGGTTGGACTGATTAAGATGGAGGGTAGTATTATGTCGAATTTGAATTTGAGTTATTCGAGTTCAAATTCGAATTCATATGGTTTGTTGAAGAGTAGAAAGAATCATGAGCGCCAAGAAAGTGACGATGAAGAAGGAAGAAGTAACAAGCAGTCTGCAGTTTGTGTTGAGGAGAGTGAAATATCTGAGATGTTTGATAGGGTTTTGCTTAGTGTCGAAAATATGCCGCTGTGTGCTGAACCAAAGGATGGATCAGTGATAGAGATTAGAACTAAGGTTGGTGAACTTGATGGAGGGAAGGCGCGTTCGAAGAAACAATGGAGGAAGAGGGAATCTGTGGATCTGAGGACCCTTTTGGTTCTTTGTGCACAAGCTGTGTCTGCTAATGACAATAAGACTGCTAATGAATTGTTGAAGCAGATTAGGAAGCATTCTTCTCCTTTAGGTGATGCATCACAGAGGGTGGCTCATTACTTTGCGAATGCGATAAAAGCGCGTATGGTTGGTGCTGGTACTGGTACACAAATATTATATATGAGCCAAAAGATGTTTAGTGCTGCTGATTTCTTGAAAGCTTACCAAGTGTTTATGTCTGCTTGCCCTTTCAAAAAGCAGAAACCCTTGAAGAATGAGGTAGTAGTTGTGAACTGTCTGGTAAGGTTTAAGAATTTACATGATGAGACAATTGAAGCGAATAGTCCTAAAGATGCAGTTTTGAAGTTAACCAGGAAGATAAATCCGAGTATATTTGTTCAATCCATAATCAATGGATCTTATAATGCCCATTTCTTTTCCACGCGCTTCAAGGAGTCACTTTTCCATTATTCTGCAACGTTTGATATGTATGATACTCTCATATCCCGTGAAAATGAATGGAGGTTGACGATTGAGAGAGAGTTTTTGGGTAGGGAGATTATGAATGTCATAGCATGTGAAGGTTTAGAGAGAGTTGAAAGGCCTGAGACTTACAAACAGTGGCAGGTTAGGAATATCAGGGCCGGTTTCAGGCAACCAAGTTATTTTTTTTTTTTTTAA 1470 0.3803 MCYDPLSLQHTQKIFFDALESNFPLSPNQHPLDVLEIPDSSCCVIDSGNSSNSNELKSLSPNTPVSGGDSGFNSISNVKSHDGVLDLDSSETRVLAQNIFSDVDSILQFRKGLEEASKFLPQNAQLFTGFENANTNNLVSHEPKGRVGLIKMEGSIMSNLNLSYSSSNSNSYGLLKSRKNHERQESDDEEGRSNKQSAVCVEESEISEMFDRVLLSVENMPLCAEPKDGSVIEIRTKVGELDGGKARSKKQWRKRESVDLRTLLVLCAQAVSANDNKTANELLKQIRKHSSPLGDASQRVAHYFANAIKARMVGAGTGTQILYMSQKMFSAADFLKAYQVFMSACPFKKQKPLKNEVVVVNCLVRFKNLHDETIEANSPKDAVLKLTRKINPSIFVQSIINGSYNAHFFSTRFKESLFHYSATFDMYDTLISRENEWRLTIEREFLGREIMNVIACEGLERVERPETYKQWQVRNIRAGFRQPSYFFFF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3351 489 MobiDBLite consensus disorder prediction 173 198 - -
Mal5g3351 489 PANTHER SCARECROW-LIKE PROTEIN 34 80 349 - -
Mal5g3351 489 Pfam GRAS domain family 260 349 IPR005202 -
Mal5g3351 489 Pfam GRAS domain family 354 482 IPR005202 -
Mal5g3351 489 PANTHER SCARECROW-LIKE PROTEIN 34 354 482 - -
Mal5g3351 489 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 80 349 IPR005202 -
Mal5g3351 489 MobiDBLite consensus disorder prediction 176 196 - -
Mal5g3351 489 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 354 482 IPR005202 -
Mal5g3351 489 ProSiteProfiles GRAS family profile. 251 489 IPR005202 -
Mal5g3351 489 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3351 Mal-Chr5 97284330 97285892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3351 354 482 GRAS Transcription Factor Family AT1G07530 68.217 2.28e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g3351 GRAS 8.8e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3351 - - cam:101504630 518.079