Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3349 ATGTTGTATTCTAGTACTGATGAATCTATTGATTTACCTCCTGGGTTTGAAAGCAGTCATTTCCCGAACCAATCGAAAGTTGAATTCTCCCACATTCCAAAGATAAAATGGGAACGCCCTCTCCCGTTTGTTTTCAGTCCTCATTGGCTAGTTGCTGCTGGGCAAGAAAGTAGCGAGAAAGAGGTTCAGAAGCGGAGAGAAATAAGAGTGCTTGAAGCAGTTTATCCCCGACTCTCTGCCATTCCTCCTAGCCCTTCTGTTTCTTTGGATGTAGAAGAGGAAGATTATGATGATAACAGTACTCCTCTCATCCCCATCATTCCGATCGAGGAGGAAGAGTATATGCCTAATTTGCCTAAATTGGCAGCAGCAGTGAACTCTCATCCCAATGTCCAGTCACAGAACTTGCAGCAATATATGTCAGCAACAACTTCCATTAGTTCAGACCGTAACACCTCCCGTACTGTCTCCCCGGATGCTTGTGTAATGCCCTTAGCAGGGGTATCTTCTGGTTCGGAAGCTGACGTAGCAGCAGCCTCTGAAGTTGTGGCAGCCATCTTGAAGAGTAATGAGCAAGGAAGCTTAATTGATATGGATCTACTCGTTAAAATATTAAATGACCCAAAAATGATTGAGAAATTGATCAATGAACATGGAGTTGCAGCCACCACTGTAAGTTCATCCTCAAATTCCATGGTTACACCCACTTCTGGATCGAAAGCTGCTTCTCCATCAGTCCCTTTGTTCACATCTACACCCGATGTGGCAGCTTCTAGGAACACACACCCTAGTTCTGTGAGTTATTCTGGGTTGAATCCGGCAAGTCCATCAGTTTCATCTTTCAATCCTACATCTGGTAAGCCAACAACTCTGTTTCCTCCTGCAATTCCATCGTATTCAATCGTGTCTTCTGCACATGACAAGCCAGCAACTGCATCAGTTCCATTGTCTAGGTCGGTATCCAGTACACCAGTATCCCCTTCTGTTTTTATGACCACCACACCTACACCTGCACCTCATATGCCCAGACCTGTCAACAATAATTTTCACATGTCAAATGGAATGCCAACTGCTTTACATAGTCAGCCTCAGCCAGATTCATATCTGGCATCTGGGGTGAAGCGATCTGCGTCTTTTACTTTTGCTTCCATATCATCTAGTGAACAAAGCACAGTTCCATTGCCTTCTTCTGGGAACATGCATACTGTTTTGAACCATGCACAAACCACTACTAGTACAAAGCCTTATCAACCCAGTTCAGGCTCAGCATCTTCTGTAAAAGATGCCAACTATTATAAAAACCTCATTAGGCAACATGGTGCAGATGGACATGATAAGCTGGACTCACAAATAGGTATCCGTCATAGTAACTTCCAAGATATGAAATTGGCACCTAACAATAATCAAGGGGAAGGGAAATACAAAAGCAAGAAACAATGCATTTACTTTAATAGCTCAAGGGGGTGCAGGAATGGTTCCGATTGCCCCTTTCAGCACGATGTTTCAGCTCAGTCGGGAGCTGGTAACTTCCCAGGGGCCCAGAATGCTAAAAGATTTAAACTGTGA 1566 0.44 MLYSSTDESIDLPPGFESSHFPNQSKVEFSHIPKIKWERPLPFVFSPHWLVAAGQESSEKEVQKRREIRVLEAVYPRLSAIPPSPSVSLDVEEEDYDDNSTPLIPIIPIEEEEYMPNLPKLAAAVNSHPNVQSQNLQQYMSATTSISSDRNTSRTVSPDACVMPLAGVSSGSEADVAAASEVVAAILKSNEQGSLIDMDLLVKILNDPKMIEKLINEHGVAATTVSSSSNSMVTPTSGSKAASPSVPLFTSTPDVAASRNTHPSSVSYSGLNPASPSVSSFNPTSGKPTTLFPPAIPSYSIVSSAHDKPATASVPLSRSVSSTPVSPSVFMTTTPTPAPHMPRPVNNNFHMSNGMPTALHSQPQPDSYLASGVKRSASFTFASISSSEQSTVPLPSSGNMHTVLNHAQTTTSTKPYQPSSGSASSVKDANYYKNLIRQHGADGHDKLDSQIGIRHSNFQDMKLAPNNNQGEGKYKSKKQCIYFNSSRGCRNGSDCPFQHDVSAQSGAGNFPGAQNAKRFKL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3349 521 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 9 521 - -
Mal5g3349 521 MobiDBLite consensus disorder prediction 224 286 - -
Mal5g3349 521 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 9 521 - -
Mal5g3349 521 ProSiteProfiles Zinc finger C3H1-type profile. 474 502 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3349 Mal-Chr5 97232198 97234017 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal5g3349 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3349 - - cam:101501407 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3349 5 97232198 97234017 Mal5g3349 5 97232198 97234017 ECH