Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3333 ATGCTCTCGGTATCTTTTCCCGCATCTCTCAGCACCGCCGCCACTTTCGCCGGCAAAACCATCTCATCACCTCCGTGCAACGTCAGACCCCGTCGAGTACTCATTTCCGCCACAGCCACCGCCACATCTACTCAGCTTCCTCCCCACGGCATGGCTTCCTGCATGTCGCTGTACGAGATTCTTGGAATTGCCGCCGTCGCTTCGGAGCAGGAGATTAAAACGGCGTACCGGAGACTCGCGAGGGTTTCACACCCTGACGTGGCGGCGGTTGATCGGAAGGATTCGTCGGCGGATGAGTTTATGAAGATTCATGCTGCGTATTCTACTCTTTCAGATCCTGAGAAGCGCGCGTGCTATGATAGAAGCTTGTTCCGGCGTCGGGAACCGTTACCGGTGACGAGATTTTCTGGCTACGGTTGTCGGAAATGGGAAACGGACCAGTGCTGGTAG 450 0.56 MLSVSFPASLSTAATFAGKTISSPPCNVRPRRVLISATATATSTQLPPHGMASCMSLYEILGIAAVASEQEIKTAYRRLARVSHPDVAAVDRKDSSADEFMKIHAAYSTLSDPEKRACYDRSLFRRREPLPVTRFSGYGCRKWETDQCW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3333 149 Pfam DnaJ domain 57 120 IPR001623 -
Mal5g3333 149 SUPERFAMILY Chaperone J-domain 51 126 IPR036869 -
Mal5g3333 149 CDD DnaJ 58 112 IPR001623 -
Mal5g3333 149 Gene3D DnaJ domain 44 135 IPR036869 -
Mal5g3333 149 PRINTS DnaJ domain signature 76 91 IPR001623 -
Mal5g3333 149 PRINTS DnaJ domain signature 58 76 IPR001623 -
Mal5g3333 149 PRINTS DnaJ domain signature 95 115 IPR001623 -
Mal5g3333 149 ProSitePatterns Nt-dnaJ domain signature. 100 119 IPR018253 -
Mal5g3333 149 PANTHER - 3 149 - -
Mal5g3333 149 ProSiteProfiles dnaJ domain profile. 56 123 IPR001623 -
Mal5g3333 149 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 149 - -
Mal5g3333 149 SMART dnaj_3 55 115 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3333 Mal-Chr5 96925560 96926009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3333 58 120 C2H2 Transcription Factor Family AT1G74250 43.284 2.72e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3333 - - cam:101494220 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3333 5 96925560 96926009 Mal5g3333 5 96925560 96926009 ECH
Mal6g1023 6 15292391 15292876 Mal5g3333 5 96925560 96926009 ECH