LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g3323	ATGAAATATCATATTGGAGTATTGGTTGAAAAATCTCTCATAAAAATTAATTGGAATAGTGAATTGAGTCTACATGACTTGATAGAGGACATGGGTAAAGAAATTGTTCGATTGGAATCACCAGACGAACCTGGGAAACGAAGTCGATTATGGTTTCACGAAGATATCATTCAAGTTCTAGAAGACAAAACAGGAACTAGTGCGATTAAAATCATATATCTGATGATGTGTGAAGATGAGGTAGAATTGGATGAAATGGCTTTCAAGAAGATGAAAAGCCTAAAAACCCTTATTATTAGAGGTGGCCATTTTTCCGGAGGACCAAAACATCTTCCAAATAGTTTAAGAGTACTTGAATGGTGGAGATATCCTTCAGAATATTTGCCATATGATTTTCATCCAAAAAAACTTGCCATATTCAAGTTACCTAGAAATTGCTTAACATCACTCATGTTGAGTAACTTATTGAAGTTCTTGAATATGAAGATTTTGAACCTTGATTATGCAGATTGTTTGACAGAACTACCTGATACATCTCTCTCAAATTTGGAAAAAATTTCATTTGAAAATTGTAAGAATTTAATTACAATTCATGAATCGGTTGGGTTATTGGATAAACTTAAAGTCTTGAGTGCCAAAGGTTGTAGTAAGCTTAATATATTTCCACCTATCAAATTGATATCCCTTGAGGAACTCAATCTTTCATTTTGCACAAATCTCGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAATATGACAAACCTTGTTGAAGCGGCCTAA	783	0.3321	MKYHIGVLVEKSLIKINWNSELSLHDLIEDMGKEIVRLESPDEPGKRSRLWFHEDIIQVLEDKTGTSAIKIIYLMMCEDEVELDEMAFKKMKSLKTLIIRGGHFSGGPKHLPNSLRVLEWWRYPSEYLPYDFHPKKLAIFKLPRNCLTSLMLSNLLKFLNMKILNLDYADCLTELPDTSLSNLEKISFENCKNLITIHESVGLLDKLKVLSAKGCSKLNIFPPIKLISLEELNLSFCTNLESFPEILGKMENMTNLVEAA*	261

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g3323	260	Gene3D	Ribonuclease Inhibitor	64	258	IPR032675	-
	Mal5g3323	260	SUPERFAMILY	L domain-like	41	256	-	-
	Mal5g3323	260	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	1	257	IPR044974	GO:0006952
	Mal5g3323	260	PANTHER	DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS)	1	257	-	-
	Mal5g3323	260	SUPERFAMILY	"Winged helix" DNA-binding domain	1	61	IPR036390	-

Showing 1 to 5 of 5 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g3323	Mal-Chr5	96667945	96669065	Proximal

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g3323	4	246	WRKY Transcription Factor Family	AT4G12020	38.931	2.87e-40	146

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g3323	-		-	mtr:MTR_8g087130	408.297

Showing 1 to 1 of 1 entries