Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3322 ATGCATGAGGAGAGATTCAAGAATAACATGCAGAGGTTGCAGAAATGGAGAACAGCTCTACAACAAGTAGCTAACTTGTCAGGCTGGCATTTCAAAATGGGGGATGGATATGAATATGAGTTTATTGGAAATATCGTTGAACATGTTTCCAACAAGATAAACCGTGTTCCTTTACCCGTTGCTGACTATCCAATTGGACTAGAGCCTCGAGTTCTAGAAATGATTTCACTTCTTGATGTTGGGTCCGATGACGAGGTCAACATGATTGGGATCCATGGAAGTGGAGGGATTGGTAAAACAACACTTGCTCTAGCTGTTTATAATTTGATTGCTGACCACTTTGAAGCTATCTGTTTTCTTGAAAACATCAGAGAAAATTCAGACAAGCATGGGCTACAACATCTCCAAAAGATTCTTCTTTCAGGAACACTTGGAGAGAAGAAAATTAAATTAACAAGTGTCAAACAAGGAATTTCAATAATAAAGCATAGACTCTGTCAAAAAAAAGTTCTTTTGATTCTAGATGATGTTGACAAAATAGAACAACTGGAGGCCTTGGTTGGAGGATCTGATTGGCTTGGTTCTGGAAGCAGAGTTATTATTACAACTAGGGACAAACATTTGTTGTCAAGGCACATGGTTGATAAAGCATATGAGTTAAAAGAATTAAACAAGAAAGACGCACTTCAATTGCTTACTTGGAAAGCTTTTAAAACAGAAAACTTTCATCCTAGTTATTTGGATGTCTTGAAACGTGCTGTAGCTTATGCTTCTGGACTTCCATTGGCTTTGATAGTAATTGGTTCCAATTTATTTGGAAAAAATATTCAAGAATGGGAATCTGCATTACATCGGTATGAAATCATTCCTAATAAGGAGATCCAAAAGATTCTCAAGATGTAG 903 0.3688 MHEERFKNNMQRLQKWRTALQQVANLSGWHFKMGDGYEYEFIGNIVEHVSNKINRVPLPVADYPIGLEPRVLEMISLLDVGSDDEVNMIGIHGSGGIGKTTLALAVYNLIADHFEAICFLENIRENSDKHGLQHLQKILLSGTLGEKKIKLTSVKQGISIIKHRLCQKKVLLILDDVDKIEQLEALVGGSDWLGSGSRVIITTRDKHLLSRHMVDKAYELKELNKKDALQLLTWKAFKTENFHPSYLDVLKRAVAYASGLPLALIVIGSNLFGKNIQEWESALHRYEIIPNKEIQKILKM* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3322 300 Gene3D - 51 216 IPR027417 -
Mal5g3322 300 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 299 IPR044974 GO:0006952
Mal5g3322 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 299 IPR027417 -
Mal5g3322 300 SMART AAA_5 85 227 IPR003593 -
Mal5g3322 300 PRINTS Disease resistance protein signature 164 178 - -
Mal5g3322 300 PRINTS Disease resistance protein signature 88 103 - -
Mal5g3322 300 PRINTS Disease resistance protein signature 257 271 - -
Mal5g3322 300 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 2 299 - -
Mal5g3322 300 Pfam NB-ARC domain 78 286 IPR002182 GO:0043531
Mal5g3322 300 Gene3D - 222 300 IPR042197 -
Mal5g3322 300 Gene3D - 1 50 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3322 Mal-Chr5 96666640 96667912 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3322 65 274 WRKY Transcription Factor Family AT5G45050 34.579 1.40e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3322 - - gmx:100780257 417.927