Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3320 ATGGCTTTGCAAGAATCTTTATCTTCTTCTTCCTTCAGTTATGGATTCACCTACGATGTGTTCCTCAGCTTTAGAGGCTTAGACACTCGCTATGGTTTTACCGGAAATCTCTACAAAGCTCTTTCTGACAAGGGAATCCACACCTTCATTGACGATGAAGAACTTGAAAGAGGGCATGAAATCACACCATCACTTTTAGAGGCAATTCAAGAGTCTAGGATCGCAATAATTGTGCTCTCTAAAAACTATGCTTCTTCTTCATTTTGCTTACATGAACTTGTTAAGATCCTTGACTGCATTAAGGGGAAGGGTAGGTTGGTATGGCCAATCTTTTATGATGTGGATCCGTCTGATGTGCGGAAGCAGACAGGATCTTATGGGGAAGCTTTAGCTATGCTTGGAGAGAGATTCAATGATAATAACTTGCAAATATGGAAAAATGCTTTGCAACAAGTAGCTAACTTGTCTGGCTGGCATTTCAAAATTGGGGATGGATATGAATACGAGTTTATTGGAAAGATTGTTGAACTCCTTTCCAAGAAGATGAACCGTGTTGCTTTACCTGTTGCTGACTACCCAGTAGGACTGGAGCCTCAAGTTCTTGAAATTAATTCACTTCTTGATGTTGGGTCCGATGACGAGGTCAACATGATTGGGATCCATGGAAGTGGAGGGATTGGTAAAACAACACTTGCTCTAGCTGTTTATAATCTGATTGCCGATCACTTTGAAGCTTTGTGTTTTCTTGAAAATGTGAGAGAAAATTCATACAAACATGGGCTACAACACATCCAAAATATTCTTCTTTCGGAAACCCTTGGAGAGAAGAAAATTAAGTTAACAAGTGTCAAACAAGGAATTTCAATAATAAAGCACAGACTCCGACAAAAAAAAGTTCTTTTGATTCTAGATGATGTTGACAAAATAGAACAACTGGAGGCCTTGGTTGGAGGATCTGATTGGCTTGGTTTTGGAAGCAGAGTTATTATTACAACTAGGGACAAACATTTGTTGTCAAGTCACGGGGTTAAGAGAACATATGAAGTAAATGTGTTGAACCAGAAAGATGCTCTTCGATTGCTTACTTGGAAAGCTTTTAAAACAGAAAAAATTCATCCTAGTTACATTGATGTCTTGAAGCGTGCAGCAAGTTATGCTTCTGGACTTCCATTGGCTTTGATAGTTATAGGTTCCAATTTATTTGGAAAGAATATACAAGAATGGGAATCTGCATTACATCGATATGAAATCATTCCTAATAAAGACATCCAGAATATACTCAAAGTAAGTTTTGATGCTTTGGAGGAAGATGAGAAAAGTGTTTTTCTTGACATAGCTTGTTTCTACACAGGAACAGAATATGGATTGGCAGATGTAGAAAATATGCTTCATGCTCATTATGATGCTTCCATGAAATATCATATTGGAGTATTGGTTGAAAAATCTCTCATAAAGATTAGTTGGGCTGGTGAATTGACTCTACATGACTTGATAGAGGACATGGCTAAAGAAATTGTTCGATTGGAATCACCGGACGAACCTGGACAACGTAGTCGATTATGGTTTCACGAAGACATAATTCATGTTCTAGAAGACAATACAGGAACTAGTGCAATCAAAACCATTTTTCTGATGTGTGAAGAAGAAGTAGAATTGGATGAAATAGCCTTCAAGAAGATGAAAAACCTAAAAACCCTAATTATCAGAGGTGGCTATTTTTCCAAAGGACCCAAACATCTTCCAAATAGTTTAAGAGTAATCGAGTGGTGGAGATATCCTTCAGAGTACTTGCCATGTGATTTTCATCCAAAGAAACTTTCCATATTCAAGTTACCAATAAGTTGTTTAACATCACTCAAGTTGATTGACTTATTGAAGAAGTTCTTGAATGTGAAGATTTTGAATCTTGATTATGCAGATTGTTTGACAGAACTACCTGATACATCTTCTCTCTTAAATTTGGAAAAATTTTCATTTGAAAATTGTAAGAATTTAATTACAATTCATGAATCACTTGGGTTATTGGATAAACTTAAAGTCTTGAGTGCCAAAGGTTGTAGTAAGCTTAAGATATTTCCACCTATCAAATTGATATCTCTTGAAGAACTCAATCTTTCATTTTGCCTGAACCTCAATAGTTTTCCACAAATACTAGGGAAGATGGAAAATATAACAGAGCTTGTGTTGGAAGAAACTCCAATAATAAAATTTCCAAGTTCATTTCAAAATCTTACTCGTCTTCAAACATTACAACTACGTTATTGTGGAACGTTTAGGTTACCAAGTACCATTTTCATGATGTCAGATTTGGTTGAGATTATTGCATGGAGATTAGAAGGCTGGACATGGCCAAAACAAGGTGAGGGAGAACAAAGAGTTATCTCAGTGGTGTCTTCAAATGTAGAATGTCTTAATCTTCCATTTTGCAAACTATCAAATGACTTTTTTCAAACAGGTGTCACATGGTTTAGAAATGTTAAAAAATTATACTTGGCACATAATAATTTCACAATTATTCCGGAATGCATTAAAGAATGTCATTTGTTAAGGGATCTTTGTTTGGATTATTGCATTTATCTTCAAGAAGTTAGAGGAATAGCGCCAAACTTAGAAATATTTTCTGCACTGGGATGTAAAGCTTGGACGTCTACAGAAATATTACTAAATCAGGAATTGCATGAAGGTGGTAGTACCATGTTTTATATGCCAGGATCAAGGATTCCAGATTGGTTCGAGCATTGTATTAGAGGAGGGTCAATTTCATTTTGGATTCGTAACAAGTTCCCTGCTATAGCTCTTTGTCTTGTTCCTGGTTCGATGTTTGTCGAATCTACAATCTACCCCATTGTGATCATCAATGGCAACGAATGTAAACTTGACTCTAGAGACGCTGACGAATACGGTGATCCTTCTTTGTGGGTTGAACCAGATCATACATATATTTTTGATCTTCAAAAGATAAAATTCGAAGATAATTTGGATGAAGCAGTTTTAGAAAATGAATGGAACCACGTGGAGATTATGTATCAGGGTAAAAACAATGCCCTAGTCCTTATAGAAAGTGGCATCCATGTATTCAAACAGAAGAATAGCATAGAGGATATTCGATTCACCAATCCTTGA 3123 0.3628 MALQESLSSSSFSYGFTYDVFLSFRGLDTRYGFTGNLYKALSDKGIHTFIDDEELERGHEITPSLLEAIQESRIAIIVLSKNYASSSFCLHELVKILDCIKGKGRLVWPIFYDVDPSDVRKQTGSYGEALAMLGERFNDNNLQIWKNALQQVANLSGWHFKIGDGYEYEFIGKIVELLSKKMNRVALPVADYPVGLEPQVLEINSLLDVGSDDEVNMIGIHGSGGIGKTTLALAVYNLIADHFEALCFLENVRENSYKHGLQHIQNILLSETLGEKKIKLTSVKQGISIIKHRLRQKKVLLILDDVDKIEQLEALVGGSDWLGFGSRVIITTRDKHLLSSHGVKRTYEVNVLNQKDALRLLTWKAFKTEKIHPSYIDVLKRAASYASGLPLALIVIGSNLFGKNIQEWESALHRYEIIPNKDIQNILKVSFDALEEDEKSVFLDIACFYTGTEYGLADVENMLHAHYDASMKYHIGVLVEKSLIKISWAGELTLHDLIEDMAKEIVRLESPDEPGQRSRLWFHEDIIHVLEDNTGTSAIKTIFLMCEEEVELDEIAFKKMKNLKTLIIRGGYFSKGPKHLPNSLRVIEWWRYPSEYLPCDFHPKKLSIFKLPISCLTSLKLIDLLKKFLNVKILNLDYADCLTELPDTSSLLNLEKFSFENCKNLITIHESLGLLDKLKVLSAKGCSKLKIFPPIKLISLEELNLSFCLNLNSFPQILGKMENITELVLEETPIIKFPSSFQNLTRLQTLQLRYCGTFRLPSTIFMMSDLVEIIAWRLEGWTWPKQGEGEQRVISVVSSNVECLNLPFCKLSNDFFQTGVTWFRNVKKLYLAHNNFTIIPECIKECHLLRDLCLDYCIYLQEVRGIAPNLEIFSALGCKAWTSTEILLNQELHEGGSTMFYMPGSRIPDWFEHCIRGGSISFWIRNKFPAIALCLVPGSMFVESTIYPIVIINGNECKLDSRDADEYGDPSLWVEPDHTYIFDLQKIKFEDNLDEAVLENEWNHVEIMYQGKNNALVLIESGIHVFKQKNSIEDIRFTNP* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3320 1040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1009 IPR044974 GO:0006952
Mal5g3320 1040 SMART till_3 17 155 IPR000157 GO:0007165
Mal5g3320 1040 Pfam NB-ARC domain 207 416 IPR002182 GO:0043531
Mal5g3320 1040 Gene3D - 180 345 IPR027417 -
Mal5g3320 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Mal5g3320 1040 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Mal5g3320 1040 SUPERFAMILY L domain-like 537 882 - -
Mal5g3320 1040 Gene3D - 351 435 IPR042197 -
Mal5g3320 1040 SMART AAA_5 214 352 IPR003593 -
Mal5g3320 1040 Gene3D - 15 179 IPR035897 -
Mal5g3320 1040 Pfam TIR domain 18 182 IPR000157 GO:0007165
Mal5g3320 1040 SUPERFAMILY "Winged helix" DNA-binding domain 422 531 IPR036390 -
Mal5g3320 1040 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Mal5g3320 1040 Gene3D Ribonuclease Inhibitor 527 887 IPR032675 -
Mal5g3320 1040 PANTHER ARCHAEAL ATPASE 28 1009 - -
Mal5g3320 1040 PRINTS Disease resistance protein signature 386 400 - -
Mal5g3320 1040 PRINTS Disease resistance protein signature 742 758 - -
Mal5g3320 1040 PRINTS Disease resistance protein signature 217 232 - -
Mal5g3320 1040 PRINTS Disease resistance protein signature 293 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3320 Mal-Chr5 96629183 96633496 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3320 12 770 WRKY Transcription Factor Family AT4G12020 31.766 8.63e-83 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3320 - - gmx:100780257 1254.2