Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3317 ATGGGTTCTCTTGGAATTGAAAGCAATTTAGAAGCTGAGGTTGTCACCGTTGATGTGCTTAAAACCAAATCTCTGATTGAGACCACCCATGTTTATCTTGATGTTAGGACGGTGGAAGAGTTTCAGCAAGGGCACGTGGATGCAGACAAGATTATTAACATTGCATACATGTTCAATACACCTGAGGGGAGGGTGAAGAATCAAGAGTTTCTGAAGGAGGTTTCGTCTCTTTGCAAGAAAGAAGATCACCTCATCGTGGGTTGCCAAAGTGGAGTGAGATCTTTGTATGCAACTGCTGATCTTCTAGCTGAAGGGTTTAAGGATGTGTACAACATGGGAGGAGGTTATCTGGAGTGGGTTAAAAAGGAATTTCCAGTGAAGATACATGTCACCAAATAG 399 0.4261 MGSLGIESNLEAEVVTVDVLKTKSLIETTHVYLDVRTVEEFQQGHVDADKIINIAYMFNTPEGRVKNQEFLKEVSSLCKKEDHLIVGCQSGVRSLYATADLLAEGFKDVYNMGGGYLEWVKKEFPVKIHVTK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3317 132 ProSiteProfiles Rhodanese domain profile. 30 128 IPR001763 -
Mal5g3317 132 Gene3D - 5 128 IPR036873 -
Mal5g3317 132 SMART rhod_4 17 125 IPR001763 -
Mal5g3317 132 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 128 IPR044684 GO:0003824
Mal5g3317 132 Pfam Rhodanese-like domain 25 121 IPR001763 -
Mal5g3317 132 CDD RHOD 31 120 - -
Mal5g3317 132 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 126 IPR036873 -
Mal5g3317 132 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3317 Mal-Chr5 96614082 96615259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3317 3 126 Sulfurtransferasese or Rhodanese AT5G66170 58.400 3.09e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3317 - K15692 cam:101497130 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3317 5 96614082 96615259 Mal5g3317 5 96614082 96615259 ECH
Mal6g1011 6 15084901 15086116 Mal5g3317 5 96614082 96615259 PCT
Mal6g0953 6 14320939 14322706 Mal5g3317 5 96614082 96615259 PCT