Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3281 ATGAATTTTAATACTTCAATTTCCCTTTTACCAGAATCACTTTTACCAAACGATGCATCACCCGAATGGAACAACAAAGCAGACAATGCATGGCAACTCACTGCAGCAACATTAGTGGGCCTTCAAACTGTTCCTGGGCTTGTAATACTTTATGGCAGCATGGTTAAGAAAAAATGGGCCGTAAATTCAGCCTTTATGGCCCTATATGCATTTGCTGCTGTGTTAGTTTGTTGGGTTTTATGGGCCCATCAAATGGCATTTGGAACCAAACTTCTACCCTTTGTTGGAAAGCCCAACTTTGCTTTGAGTCAAAAGTTTCTACTTTCAAAGGCATCAACACAATATTATTTACCAATGGCTGATTTTGTTTTCTATCAATTTGCTTTTGCTGCAATTACTCTTGTGTTGCTTGCAGGGTCTTTGCTTGGGAGAATGAATTTTTATGCATGGATGTTGTTTGTTCCTATGTGGCTTACATTGTCATATACAATTGGTGCTTTTACTATATGGGGGAATGGTTTTCTTGAGGGGAAAATAATTGATTATGCTGGTGGATTTGTAATTCACCTATCCTCTGGTGTTGCAGGTTTCACAGCTGCTTATTGGGTTGGTCCAAGAACTTCAAAAGATAGGCAAAATTTTCCACCAAATAACATAATTCACATGCTTGGAGGTGCAGGGTTCTTATGGATGGGTTGGACAGGTTTTAATGGTGGAGCACCATTTCAAGTGGGAGAGATTACATCCTTAGCAATATTCAATACCCATTTGTGCACTGCCACAAGCCTACTTGTTTGGCTTTCCTTAGATATGATGGTATACAAAAAGGGCTCATTGATTGGTTCTGTCCAAGGAATGATGACTGGTCTCGTTTGCATCACACCAGGTGCAGGATTGGTGGATCCATGGGCAGCAATATTGATGGGAGCTTTGTCCGGTTCAATCCCATGGTACACAATGATGGTGCTACACAAAAGATCATCATTCTTTCAAAGTGTAGATGATACATTAGGAGTTTTTCACACTCATGCAGTGGCTGGTATTCTTGGGGGAATCCTTTCTGGTGTGTTTGCCAAACCTAAACTTTTGAGGATTCTCTATGGGCCTGAAATTTCTTATGGGCCTGGCTTATTATATAGTTATTTTGATGATAATTTGGATCAAGGAATCAAGCAAATATTGTACCAATTACTGGGAGCAATTTTTATTACTATTTGGAATGTTGTTATTACTAGTCTCATTTGTATTCTTTTAAATCGCTTTGTGGATCTTCGAATGCAAGAAGAAGATCTTGAGGTTGGTGATGATGCTGCTCATGGAGAAGAAGCTTATGTATTATGGGGTGATGGAGAAAGAATGATCCTACCTCTTCGTCTACATATAAGTCCAATAATTCCTTCCATTTCTCACCAAAGACATTCAATTCCTATCAATAAAATTGAGGAGTAA 1449 0.3899 MNFNTSISLLPESLLPNDASPEWNNKADNAWQLTAATLVGLQTVPGLVILYGSMVKKKWAVNSAFMALYAFAAVLVCWVLWAHQMAFGTKLLPFVGKPNFALSQKFLLSKASTQYYLPMADFVFYQFAFAAITLVLLAGSLLGRMNFYAWMLFVPMWLTLSYTIGAFTIWGNGFLEGKIIDYAGGFVIHLSSGVAGFTAAYWVGPRTSKDRQNFPPNNIIHMLGGAGFLWMGWTGFNGGAPFQVGEITSLAIFNTHLCTATSLLVWLSLDMMVYKKGSLIGSVQGMMTGLVCITPGAGLVDPWAAILMGALSGSIPWYTMMVLHKRSSFFQSVDDTLGVFHTHAVAGILGGILSGVFAKPKLLRILYGPEISYGPGLLYSYFDDNLDQGIKQILYQLLGAIFITIWNVVITSLICILLNRFVDLRMQEEDLEVGDDAAHGEEAYVLWGDGERMILPLRLHISPIIPSISHQRHSIPINKIEE* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3281 482 Gene3D Ammonium transporter AmtB like domains 13 447 IPR029020 -
Mal5g3281 482 PRINTS Rhesus blood group protein signature 126 142 IPR002229 GO:0005887
Mal5g3281 482 PRINTS Rhesus blood group protein signature 220 238 IPR002229 GO:0005887
Mal5g3281 482 PRINTS Rhesus blood group protein signature 251 273 IPR002229 GO:0005887
Mal5g3281 482 PRINTS Rhesus blood group protein signature 344 360 IPR002229 GO:0005887
Mal5g3281 482 TIGRFAM amt: ammonium transporter 28 444 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mal5g3281 482 ProSitePatterns Ammonium transporters signature. 181 206 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mal5g3281 482 SUPERFAMILY Ammonium transporter 23 425 - -
Mal5g3281 482 Pfam Ammonium Transporter Family 30 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mal5g3281 482 PANTHER AMMONIUM TRANSPORTER 7 473 - -
Mal5g3281 482 PANTHER AMMONIUM TRANSPORTER MEP2 7 473 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3281 Mal-Chr5 96023249 96025598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3281 119 452 Inorganic Solute Cotransporters AT2G38290 58.806 1.51e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3281 K03320 - gmx:100815876 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3239 7 96489221 96494088 Mal5g3281 5 96023249 96025598 PCT