Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3279 ATGGGCGTATCCAAGAAATGGTTAGGAATCGTTCGTAGAAAATTCCTAAGATCATCCAACAAAGACATTATAACTCTCCCTCCTCGTAAAAGTGTTTGCACAAATCAAAGTGAACAAGCCATACTTGGAATTGAATCAACCACTACATTAATCAGCTTGCCACCACCAGCTATTAATTCTTCATTCACCAAAGAAGACTTTGCAGCAATTAAGATTCAAGCTTATTTCAGGGGTCATCTCGCAAGAAGAGCACATAGGGCATTGAAAAGCCTAGTGAAATTGCAAGCATTGGTTCGTGGGGTGTGTGTGAGGAGACAATCACGTATAGCAATGCAGTGTATGCATGCACTTGTTCGATTACAAGTCAAGGTTCGTGCAAGGCAATTACTCGGTAGTTTTGATCATAGTCGATAA 414 0.4058 MGVSKKWLGIVRRKFLRSSNKDIITLPPRKSVCTNQSEQAILGIESTTTLISLPPPAINSSFTKEDFAAIKIQAYFRGHLARRAHRALKSLVKLQALVRGVCVRRQSRIAMQCMHALVRLQVKVRARQLLGSFDHSR* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3279 137 ProSiteProfiles IQ motif profile. 89 116 IPR000048 GO:0005515
Mal5g3279 137 PANTHER IQ-DOMAIN 5-RELATED 4 131 - -
Mal5g3279 137 Pfam IQ calmodulin-binding motif 68 86 IPR000048 GO:0005515
Mal5g3279 137 SMART iq_5 87 108 IPR000048 GO:0005515
Mal5g3279 137 SMART iq_5 64 86 IPR000048 GO:0005515
Mal5g3279 137 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Mal5g3279 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 109 IPR027417 -
Mal5g3279 137 PANTHER OS04G0561100 PROTEIN 4 131 - -
Mal5g3279 137 Gene3D - 64 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3279 Mal-Chr5 95984918 95985441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3279 1 131 IQD Protein Family AT3G51380 51.908 2.40e-35 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3279 - - cam:101507643 196.823