Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3249 ATGGTTAATCCTTCTGAAGATAACAATTCAAACGCAGTGATTCCAAGAAAATTTCAAGGAGGAATGAATCAAATGGGTGGTGGTGGTGGAAGAATTGTGGGGCAGAACAGAAGAACTTTGGGTGCGATCAATCAGAATTTTGTGCATGGTCGACCTTACCCTTGTGTTGTTCACAAGAGGGTGTTATCTGACAAACATGAGATTGCTGAAAAGAAACAGGCTGATATGGGACATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTGGCTCACAGCAATCTTTTGCTGAGAAAACCAAGAATTCAAATCCATTGAATTCTAATGAGTTTGGAAACGCCATAGCCATTGATGATGAACACAAGTCACCAGAAGAACAACCTGAGCCTATGGCTTTAGAGCACACTGAGCCAATGCTTAGTGATCCACTTGAGATGGAAGAGGTTGAGATGGAGGATATAGATGGAGAGGTGATTTATGACATTGATAGCTGTGATGCAAACAATTCTCTTGCTGTTGTGGAATATATTGAAGATCTCCATGCTTACTACAGAAAGATTGAGTGTATTGGCTGTGTTTCACCAAACTACATGGATGAACAACCTGACCTTAATGAGAAGATGAGGGCTATTCTAATTGACTGGCTGATTGAGGTTCATGACAAATTCGACCTCATGCAAGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTCTTGGCTAAGCAGAATGTGGTAAGAAAGAAACTTCAGCTGGTTGGTCTTGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCCGTGCCTGTCGTTTCGGATCTAATCCACATATCCGACAAAGCTTACACAAGGAAGGATGTTCTCGAAATGGAGAAGTCGATACTCAACACCTTGCAGTATAACATGTCTCTGCCAACTGCTTATGTTTTCATGAGAAGGTTTCTGAAGGCTGCTCAAGCTGACAAAAAACTTGAGCTGGTGGCTTTTTTCTTGGTTGAGCTGTCTCTGGTGGAATATGAGATGCTGAAGTTTCCACCATCCCTGGTGGCTGCAGCTGCTGTCTACACAGCTCAATGCACTGTCAGTGGTTTCAAACACTGGAACAAGACTTGCGAGTGGCACACAAACTACTCCGAAGATCAGCTATTAGAGTGCTCTAAGATGATGGTTGGATTCCACCAGAAAGCTGGAACAGGAAAACTGACAGGAGTGCATAGGAAGTATGGCTCAGCAAAATTTAGCTTCATTGCTAAATGTGAACCAGCATGTTTTCTTCTGGAGAACAACAACCAGTCATAG 1305 0.4253 MVNPSEDNNSNAVIPRKFQGGMNQMGGGGGRIVGQNRRTLGAINQNFVHGRPYPCVVHKRVLSDKHEIAEKKQADMGHRPITRRFAAQIAGSQQSFAEKTKNSNPLNSNEFGNAIAIDDEHKSPEEQPEPMALEHTEPMLSDPLEMEEVEMEDIDGEVIYDIDSCDANNSLAVVEYIEDLHAYYRKIECIGCVSPNYMDEQPDLNEKMRAILIDWLIEVHDKFDLMQETLFLTINLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHISDKAYTRKDVLEMEKSILNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFLVELSLVEYEMLKFPPSLVAAAAVYTAQCTVSGFKHWNKTCEWHTNYSEDQLLECSKMMVGFHQKAGTGKLTGVHRKYGSAKFSFIAKCEPACFLLENNNQS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3249 434 Pfam Cyclin, N-terminal domain 181 305 IPR006671 -
Mal5g3249 434 PANTHER CYCLINS 25 428 IPR039361 -
Mal5g3249 434 SMART Cyclin_C_2 307 424 IPR004367 -
Mal5g3249 434 CDD CYCLIN 305 392 IPR013763 -
Mal5g3249 434 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Mal5g3249 434 PIRSF Cyclin_A_B_D_E 9 434 IPR039361 -
Mal5g3249 434 SMART cyclin_7 214 298 IPR013763 -
Mal5g3249 434 SMART cyclin_7 311 393 IPR013763 -
Mal5g3249 434 CDD CYCLIN 208 297 IPR013763 -
Mal5g3249 434 Pfam Cyclin, C-terminal domain 307 423 IPR004367 -
Mal5g3249 434 MobiDBLite consensus disorder prediction 90 111 - -
Mal5g3249 434 PANTHER CYCLIN-B2-1 25 428 - -
Mal5g3249 434 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Mal5g3249 434 SUPERFAMILY Cyclin-like 307 423 IPR036915 -
Mal5g3249 434 Gene3D - 193 305 - -
Mal5g3249 434 Gene3D - 179 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3249 Mal-Chr5 95495116 95498946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3249 7 428 Core Cell Cycle Gene Families AT1G20610 56.813 2.82e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3249 K21777 - gmx:100798068 610.912