Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3241 ATGGGTCTCTGTTTTTCCTTTCTCTGCCCCTCCTCTGCACCCCCCCAATCATCTTCTTCCTTCAACAGACCTCTTTCTTCAGGTTCAACAAGCACTGTAGGATTCTCAGCAACAACAAGCAGTGCTGGAAGGAGCCAATTCTCTGACGTAGCAAGTGGAAGCATTGATGATACTAATGAAGGGTCACTTCCTTTTCCTTCACCAAATGGTCAAATTCTTGAAAGACCAAATTTGAAGGTTTTTAGTTTTGTTGAATTGAAAGCTGCTACAAAAAGCTTCAAATCTGATACATTACTTGGTGAAGGTGGTTTTGGAAAAGTTTATAAAGGTTGGTTAGATGAGAAAACACTTTCCCCTACTAAAGCAGGTTCTGGAATGGTTGTTGCTATAAAAAAATTGAACTCTGAAAGTACTCAAGGTTTTCAAGAATGGCAGTCAGAAGTTAACTTTTTAGGAAGGCTTTCTCACCCAAACTTGGTGAAGCTATTGGGATACTGTTGGGACGATGACGAGCTTCTTCTCGTGTACGATTTCATGCCGAAAGGAAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATTGAACCACTTTCTTGGAACACAAGAATCAAAATAGCTATTGGTGCAGCTCGTGGTTTGGCTTTCTTGCACGATTCCGCACAGCAAGTCATATACAGAGATTTTAAGGCTTCAAATATACTCCTCGACGGGAGTTTCAATGCAAAAATCTCAGATTTTGGATTAGCTAAATTGGGGCCTTCTGGGGGACAATCTCATGTAACAACCAGGGTCATGGGGACTTATGGTTATGCTGCTCCAGAATACATTGCAACAGGGCACTTGTATGTGAAGAGTGATGTGTATGGCTTTGGTGTAGTGCTGTTAGAAATCCTAACAGCCATGAGGGCATTAGACACCAAAAGACCAACAGGACAACAAAACCTAGTTGAATGGGTGAAACCTTTTCTCTCCAATAAGAAAAAATTGAAAGGAATAATGGATGCTAGAATAGAAGGACAATACTCACCAAAGGCAGCAATACAAGCAGCAGCACTTTCTCTAAAGTGCTTAGAAAATGACCCTAAACAACGTCCTTCTATGAATGAAGTGGTTGAGTCATTGGAAGCTATTGAAGCCATTAAGGTGAAATCCAAGGCATTCAAAAACAACAATTCTCATCAATCTCCAGTTCTTCAAGCTGCTAGGCACCAAAGAGTTGTAAAAGTATAA 1233 0.4055 MGLCFSFLCPSSAPPQSSSSFNRPLSSGSTSTVGFSATTSSAGRSQFSDVASGSIDDTNEGSLPFPSPNGQILERPNLKVFSFVELKAATKSFKSDTLLGEGGFGKVYKGWLDEKTLSPTKAGSGMVVAIKKLNSESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYDFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHDSAQQVIYRDFKASNILLDGSFNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTAMRALDTKRPTGQQNLVEWVKPFLSNKKKLKGIMDARIEGQYSPKAAIQAAALSLKCLENDPKQRPSMNEVVESLEAIEAIKVKSKAFKNNNSHQSPVLQAARHQRVVKV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3241 410 ProSiteProfiles Protein kinase domain profile. 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3241 410 CDD STKc_IRAK 99 378 - -
Mal5g3241 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Mal5g3241 410 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 53 391 - -
Mal5g3241 410 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Mal5g3241 410 Gene3D Transferase(Phosphotransferase) domain 1 179 403 - -
Mal5g3241 410 ProSitePatterns Protein kinases ATP-binding region signature. 99 132 IPR017441 GO:0005524
Mal5g3241 410 PANTHER OS01G0588500 PROTEIN-RELATED 53 391 - -
Mal5g3241 410 Pfam Protein tyrosine and serine/threonine kinase 96 375 IPR001245 GO:0004672|GO:0006468
Mal5g3241 410 SUPERFAMILY Protein kinase-like (PK-like) 70 376 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3241 Mal-Chr5 95194484 95198482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3241 79 375 Glycoside Hydrolase AT3G07070 53.691 9.26e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g3241 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3241 - - gmx:100794193 651.358