Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3226 ATGATTAGAGTTTGGCTTGTGGTGTTGATGGTTTTCTCCAATTTGTTCTCTTCAACTGTGGTTGGCTTGGATAATTCCACAGTGCCTCCATTTGTAAATATTGGAGTTCTCTTCTCTTTCAATACTAGTGTTGGTAGAATAGTGAAAATTGCGGTAGACGCTGCGGTTGAGGATATAAATTCTGATCCTTTTATACTTGGTAACACTAAGTTGAAGCTCTCACTTCAAGAAGATTCAAAATACAGAGGCTTTTTGAGCATTGCTGAGGCGTTGCAGCTTATGGCGACACAAACTGTGGCCATTATCGGTCCTCAGACGTCTACGACAGCTCATGTCATATCTCATATAGCAAATGAGCTTCAGGTTCCTTTGCTATCATTTACAGCCACTGATCCTACTCTTTCTTCGCTTCAATTCCCGTTCTTCGTCAGAACTTCTTTCAATGACATTTTTCAAATGACTGCAATAGCTGACATTGTTAGCCACTATGGTTGGAGAGAGGTTATCGCAGTCTATGGTGATGACGACCATGGAAGGAATGGAATTAGTGCGTTGGGGGATAAGCTTGCTGAGAGGCGTTGCAAGATCTCGTTTAAAGCAGCAATGACTCCTGATGCAAAGAGTGAGGAGATTACTGATGTGCTTGTTCAGGTTGCCCTGGCGGAATCTCGGGTTATAGTTCTTCACACAAGTACTGCTTGGGGTCCAAAGGTGTTGAGTGTGGCAAAGTCTCTTGGAATGATGCAAAATGGTTATGTCTGGATTGCTACTACTTTTCTCACATCTTATATTGACATAGATAGTCCTCTCTCTTCAGATGAAATGGATAACATTCAAGGAGTTCTAACACTAAGAATGTACATACCGGATTCGAAGCTCAAAAGATCGTTCCTTTCTAGGTGGACGAATTTGACTAGTGGAAAGACTGCAAATGGTCCTCTTGGTTTGAGTACTTATGGTATCTTTGCATATGATACTGTTTATGTGCTTGCCCGCGCCCTTGATACATTTTTGAAACAAGGGAACCAGATTACGTTTTCGAGTGATCCAAAGTTAAATCAACCACGTGGAGACAGCTTGCATCTTGACGCTGTGAAAATTTTCAATGAAGGAGATCTGTTACGTAAAAGTATTTATGAGGTTAACATGACCGGCGTAACAGGTCCATTCTGGTATACACCTAATGAAAACGTTGCAAATCCAGCATATGAGATCATCAATGTGATCGGAACAGGGACTCGCAGGATCGGTTATTGGTCTAATTACTCCGGATTATCAGTTGTTCCTCCAGAAACACTTTATTCAAAACCGCCTAATCGTTCCATTGAAAATCAAAAGCTACTCACTGTCTTTTGGCCAGGAGAAACAACCCAGAGACCACGCGGTTGGGTTTTTCCGAACAATGGAAAGCTGTTAAAAATCGGAGTACCTAGAAGAACTAGTTACCGTGAATTTGTTTCTCAGGTACAATCCACTGACACGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTAAACTTGTTGCCTTATGCTGTCCCCTATAAGTTTGTTCCATATGGTGATGGTCAAAACAATCCTAGTAATACTGAGCTTGTGCGTCTGATCACTGCCGGTGTCTTTGATGCTGCAGTAGGTGACATCACAATTACTACAGAGAGAACAAAGATGGTGGATTTTACTCAGCCGTATATTGAGTCTGGTCTAGTGGTAGTAGCATCGGTTAAGAAGACGGATTCCAATGCTTGGGCATTTTTGACACCATTTACACCAATGATGTGGACTGTAACAGCTCTCTTTTTCCTACTAGTTGGAGCTGTTGTATGGATTCTAGAGCATAGACTGAATGATGATTTTAGAGGACCTCCTAAAAAACAAGTAGCCACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTCGCTCACAGGGAAAATACAGTGAGCACTCTTGGTCGTTTTGTCCTGCTTATATGGCTATTTGTAGTTCTAATAATCAACTCGAGTTACACAGCAAGCCTGACTTCAATCCTCACAGTGCAACAACTTTCTTCACCTATTAAAGGCATTGAAAGTTTAGTAAATAGCAAAGAGCCTGTTGGTTACTTACAGGGTTCATTTTCCCGATCTTATTTGATTGATGAAATCGGTATTCATGAATCGAGATTAGTTCCTATGAAAACACCTGAAGAGACTATGAAAGCACTGGAGAAAGGTCCCCAGAAGGGTGGTATTGCTGCATATGTTGACGAGCGTGCTTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTTTAGTATTGTAGGTCAAGAGTTTACCAGAAATGGTTGGGGATTTTCTTTTCCACAAGACTCACCATTAGCAGTTGACCTGTCAACTGCCATTTTGGAGTTGGCAGAAAATGGAGATTTACAAAGGATCCATGACAAATGGCTTCTAAGCAGTGCTTGTCGATCACAAGGCGCAAAGCTTGAAGTAGATAGACTCAATCTCAAAAGCTTTTGGGGCCTTTACCTGGTTTGTGGTTTGGCATGTTTCATTGCTCTCTTGATATATCTTGTTCAGACCTTAAGGCAGTACAAGAAGCACAGTCCAGAGGAACTTGAGTCTTCTGGCCATGGCTCAGGATCTTCGCGTCTGCGGACGTTTCTTTCATTTGTAGATGAAAAAGAAGCGATAGTTAAGAGCCGCTCGAAGAGAAGGCAAATGGAGAGGATATCATATAGAAGCACAAGTGAGGTTGGATCAAACACCGTCTCCAATAAAGATTTTTCTCGGTCATCTACATCGTTAAACAGAATTGATTCTGCTAATGAAGTCTGA 2823 0.4152 MIRVWLVVLMVFSNLFSSTVVGLDNSTVPPFVNIGVLFSFNTSVGRIVKIAVDAAVEDINSDPFILGNTKLKLSLQEDSKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFVRTSFNDIFQMTAIADIVSHYGWREVIAVYGDDDHGRNGISALGDKLAERRCKISFKAAMTPDAKSEEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMQNGYVWIATTFLTSYIDIDSPLSSDEMDNIQGVLTLRMYIPDSKLKRSFLSRWTNLTSGKTANGPLGLSTYGIFAYDTVYVLARALDTFLKQGNQITFSSDPKLNQPRGDSLHLDAVKIFNEGDLLRKSIYEVNMTGVTGPFWYTPNENVANPAYEIINVIGTGTRRIGYWSNYSGLSVVPPETLYSKPPNRSIENQKLLTVFWPGETTQRPRGWVFPNNGKLLKIGVPRRTSYREFVSQVQSTDTFKGFCIDVFLSAVNLLPYAVPYKFVPYGDGQNNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTALFFLLVGAVVWILEHRLNDDFRGPPKKQVATILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKEPVGYLQGSFSRSYLIDEIGIHESRLVPMKTPEETMKALEKGPQKGGIAAYVDERAYIELFLSSRCDFSIVGQEFTRNGWGFSFPQDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACRSQGAKLEVDRLNLKSFWGLYLVCGLACFIALLIYLVQTLRQYKKHSPEELESSGHGSGSSRLRTFLSFVDEKEAIVKSRSKRRQMERISYRSTSEVGSNTVSNKDFSRSSTSLNRIDSANEV* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3226 940 CDD GluR_Plant 470 812 - -
Mal5g3226 940 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Mal5g3226 940 Pfam Bacterial extracellular solute-binding proteins, family 3 492 812 IPR001638 -
Mal5g3226 940 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Mal5g3226 940 Gene3D - 583 709 - -
Mal5g3226 940 MobiDBLite consensus disorder prediction 898 940 - -
Mal5g3226 940 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Mal5g3226 940 Gene3D - 471 582 - -
Mal5g3226 940 PANTHER GLUTAMATE RECEPTOR 12 930 - -
Mal5g3226 940 SUPERFAMILY Periplasmic binding protein-like I 28 464 IPR028082 -
Mal5g3226 940 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Mal5g3226 940 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Mal5g3226 940 Gene3D - 50 400 - -
Mal5g3226 940 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 930 - -
Mal5g3226 940 MobiDBLite consensus disorder prediction 908 940 - -
Mal5g3226 940 Gene3D - 754 819 - -
Mal5g3226 940 Gene3D - 148 425 - -
Mal5g3226 940 PIRSF IGluLR_plant 1 940 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3226 Mal-Chr5 94574913 94578353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3226 5 914 Ion Channels AT3G51480 58.927 0.0 1142